Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Mir30d-201ENSMUST00000083503 82 ntBASIC2.11□□□□□ -2.07
Hoxd9P28357 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxd9P28357 Gm26257-201ENSMUST00000122500 107 ntBASIC2.1□□□□□ -2.07
Hoxd9P28357 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.1□□□□□ -2.07
Hoxd9P28357 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.1□□□□□ -2.07
Hoxd9P28357 Gm24201-201ENSMUST00000082946 125 ntBASIC2.1□□□□□ -2.07
Hoxd9P28357 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.1□□□□□ -2.07
Hoxd9P28357 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Hoxd9P28357 Gm25991-201ENSMUST00000102439 99 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hoxd9P28357 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Gm22944-201ENSMUST00000158662 133 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Gm22914-201ENSMUST00000175195 77 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Mir7241-201ENSMUST00000184532 64 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 Gm3724-201ENSMUST00000197957 349 ntBASIC2.09□□□□□ -2.07
Hoxd9P28357 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.09□□□□□ -2.08
Hoxd9P28357 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Hoxd9P28357 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hoxd9P28357 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hoxd9P28357 Mir344e-201ENSMUST00000104677 66 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Gm25056-201ENSMUST00000157372 62 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Gm24401-201ENSMUST00000157868 91 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Gm24661-201ENSMUST00000083205 104 ntBASIC2.08□□□□□ -2.08
Hoxd9P28357 Gm23551-201ENSMUST00000116852 121 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Mir1899-201ENSMUST00000122798 96 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Gm25300-201ENSMUST00000175284 84 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Gm22264-201ENSMUST00000178200 107 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Mir6406-201ENSMUST00000183592 120 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Mir7226-201ENSMUST00000184953 60 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.07□□□□□ -2.08
Hoxd9P28357 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Gm24044-201ENSMUST00000083107 156 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Mir494-201ENSMUST00000093632 85 ntBASIC2.07□□□□□ -2.08
Hoxd9P28357 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Hoxd9P28357 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm25756-201ENSMUST00000103990 136 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm25094-201ENSMUST00000103992 131 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm12469-201ENSMUST00000117623 207 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm23170-201ENSMUST00000157158 106 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm23208-201ENSMUST00000158666 127 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm26359-201ENSMUST00000158873 101 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm27979-201ENSMUST00000185126 56 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Gm25402-201ENSMUST00000082966 131 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Mir93-201ENSMUST00000083593 88 ntBASIC2.06□□□□□ -2.08
Hoxd9P28357 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Hoxd9P28357 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
Hoxd9P28357 Gm23950-201ENSMUST00000104026 129 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Gm22544-201ENSMUST00000104349 127 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Gm22494-201ENSMUST00000104495 128 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Gm15536-201ENSMUST00000121411 114 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Mir7017-201ENSMUST00000184894 62 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Snord45b-201ENSMUST00000082797 71 ntBASIC2.05□□□□□ -2.08
Hoxd9P28357 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Hoxd9P28357 Gm27450-201ENSMUST00000104632 90 ntBASIC2.04□□□□□ -2.08
Hoxd9P28357 Gm23661-201ENSMUST00000122630 87 ntBASIC2.04□□□□□ -2.08
Hoxd9P28357 Gm37557-201ENSMUST00000191640 139 ntBASIC2.04□□□□□ -2.08
Hoxd9P28357 Gm26029-201ENSMUST00000158659 132 ntBASIC2.03□□□□□ -2.08
Hoxd9P28357 Gm23289-201ENSMUST00000175615 108 ntBASIC2.03□□□□□ -2.08
Hoxd9P28357 Snord43-201ENSMUST00000199549 108 ntBASIC2.03□□□□□ -2.08
Hoxd9P28357 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.03□□□□□ -2.08
Hoxd9P28357 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Hoxd9P28357 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Hoxd9P28357 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Hoxd9P28357 Gm24009-201ENSMUST00000157734 93 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Gm24900-201ENSMUST00000158128 134 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Gm22159-201ENSMUST00000158412 130 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Gm22093-201ENSMUST00000158980 111 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Mir5104-201ENSMUST00000175319 94 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Gm27297-201ENSMUST00000183395 105 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Mir7026-201ENSMUST00000184384 67 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Gm43927-201ENSMUST00000204599 117 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Snord60-201ENSMUST00000082834 78 ntBASIC2.02□□□□□ -2.09
Hoxd9P28357 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm11857-201ENSMUST00000119817 324 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm22802-201ENSMUST00000175621 89 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm38295-201ENSMUST00000191951 151 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm22753-201ENSMUST00000083657 107 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Mir151-201ENSMUST00000083678 68 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Snora69-201ENSMUST00000083708 131 ntBASIC2.01□□□□□ -2.09
Hoxd9P28357 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Hoxd9P28357 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Hoxd9P28357 Gm23881-201ENSMUST00000116872 66 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm16510-201ENSMUST00000153501 249 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm25368-201ENSMUST00000158847 131 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm24177-201ENSMUST00000158927 131 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm23714-201ENSMUST00000179259 105 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Mir8119-201ENSMUST00000183371 129 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm27898-201ENSMUST00000183987 80 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm24202-201ENSMUST00000082948 103 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Mir300-201ENSMUST00000083485 79 ntBASIC2□□□□□ -2.09
Hoxd9P28357 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.99□□□□□ -2.09
Hoxd9P28357 Mir741-201ENSMUST00000103931 71 ntBASIC1.99□□□□□ -2.09
Hoxd9P28357 Mir876-201ENSMUST00000104659 81 ntBASIC1.99□□□□□ -2.09
Hoxd9P28357 Gm24237-201ENSMUST00000157790 132 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 186.5 ms