Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.09□□□□□ -2.42
Cdx1P18111 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.09□□□□□ -2.42
Cdx1P18111 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.09□□□□□ -2.42
Cdx1P18111 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.1□□□□□ -2.43
Cdx1P18111 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.1□□□□□ -2.43
Cdx1P18111 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.1□□□□□ -2.43
Cdx1P18111 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.11□□□□□ -2.43
Cdx1P18111 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Snord80-202ENSMUST00000199023 77 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Snord61-201ENSMUST00000083176 71 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Mir214-201ENSMUST00000083582 110 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.12□□□□□ -2.43
Cdx1P18111 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm44409-201ENSMUST00000198810 166 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Cdx1P18111 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.13□□□□□ -2.43
Cdx1P18111 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Mir669g-201ENSMUST00000116809 123 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Mir363-201ENSMUST00000093598 75 ntBASIC-0.14□□□□□ -2.43
Cdx1P18111 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.15□□□□□ -2.43
Cdx1P18111 Mir669l-201ENSMUST00000103771 98 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Cdx1P18111 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.16□□□□□ -2.44
Cdx1P18111 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Cdx1P18111 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm27465-201ENSMUST00000184290 91 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.17□□□□□ -2.44
Cdx1P18111 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Mir764-201ENSMUST00000103259 108 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.18□□□□□ -2.44
Cdx1P18111 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Mir327-201ENSMUST00000199328 69 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm23970-201ENSMUST00000083319 107 ntBASIC-0.19□□□□□ -2.44
Cdx1P18111 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 182.8 ms