Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rny3-201ENSMUST00000083011 102 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Mir463-201ENSMUST00000093570 75 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Mir582-201ENSMUST00000103758 81 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm24686-201ENSMUST00000157755 93 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-0.86□□□□□ -2.55
Col1a1P11087 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm25410-201ENSMUST00000083758 137 ntBASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.86□□□□□ -2.55
Col1a1P11087 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.87□□□□□ -2.55
Col1a1P11087 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.88□□□□□ -2.55
Col1a1P11087 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.89□□□□□ -2.55
Col1a1P11087 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Snord100-201ENSMUST00000116836 74 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm25507-201ENSMUST00000116981 144 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.9□□□□□ -2.55
Col1a1P11087 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm24717-201ENSMUST00000157522 124 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.91□□□□□ -2.55
Col1a1P11087 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.91□□□□□ -2.56
Col1a1P11087 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm22638-201ENSMUST00000179674 107 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm24399-201ENSMUST00000157869 74 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm22212-201ENSMUST00000158096 106 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.92□□□□□ -2.56
Col1a1P11087 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm23379-201ENSMUST00000180026 107 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.93□□□□□ -2.56
Col1a1P11087 Gm26369-201ENSMUST00000157825 100 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 176.8 ms