Protein–RNA interactions for Protein: P0CG49
Ubb, Polyubiquitin-B, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Ubb | P0CG49 | Gm22571-201 | ENSMUST00000082984 | 70 nt | BASIC | -1,44 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm22364-201 | ENSMUST00000083097 | 98 nt | BASIC | -1,44 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir146-201 | ENSMUST00000083667 | 65 nt | BASIC | -1,44 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm26360-201 | ENSMUST00000158872 | 103 nt | BASIC | -1,45 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm38019-201 | ENSMUST00000195133 | 380 nt | BASIC | -1,45 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm43907-201 | ENSMUST00000203128 | 117 nt | BASIC | -1,45 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm23320-201 | ENSMUST00000104462 | 127 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm25055-201 | ENSMUST00000157369 | 76 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm24296-201 | ENSMUST00000158297 | 106 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm24498-201 | ENSMUST00000158445 | 102 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm25656-201 | ENSMUST00000158466 | 66 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm22946-201 | ENSMUST00000158558 | 82 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir6904-201 | ENSMUST00000183443 | 67 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir145b-201 | ENSMUST00000184434 | 75 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Ighv15-1-201 | ENSMUST00000194450 | 276 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir201-201 | ENSMUST00000083470 | 66 nt | BASIC | -1,46 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir7043-201 | ENSMUST00000184219 | 70 nt | BASIC | -1,47 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm45313-201 | ENSMUST00000210584 | 178 nt | BASIC | -1,47 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Mir181a-1-201 | ENSMUST00000083631 | 87 nt | BASIC | -1,47 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm25337-201 | ENSMUST00000083723 | 104 nt | BASIC | -1,47 | □□□□□ -2,64 | | |
Ubb | P0CG49 | Gm11936-201 | ENSMUST00000118323 | 160 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24381-201 | ENSMUST00000122697 | 104 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm28927-201 | ENSMUST00000191528 | 272 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm37404-201 | ENSMUST00000195726 | 359 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | AC108945.1-201 | ENSMUST00000226477 | 94 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Snord61-201 | ENSMUST00000083176 | 71 nt | BASIC | -1,48 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm14001-201 | ENSMUST00000118847 | 247 nt | BASIC | -1,49 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm11388-201 | ENSMUST00000120908 | 159 nt | BASIC | -1,49 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24737-201 | ENSMUST00000158861 | 100 nt | BASIC | -1,49 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir677-202 | ENSMUST00000197076 | 78 nt | BASIC | -1,49 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm25773-201 | ENSMUST00000116718 | 127 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir669d-2-201 | ENSMUST00000116854 | 86 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22032-201 | ENSMUST00000116946 | 116 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Olfr1172-ps1-201 | ENSMUST00000121530 | 192 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22675-201 | ENSMUST00000158430 | 104 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | AC192333.1-201 | ENSMUST00000224573 | 376 nt | BASIC | -1,5 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24336-201 | ENSMUST00000104203 | 146 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm23072-201 | ENSMUST00000158243 | 123 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22612-201 | ENSMUST00000158293 | 101 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm23859-201 | ENSMUST00000158383 | 64 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Olfr1401-ps1-201 | ENSMUST00000202296 | 211 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24614-201 | ENSMUST00000083269 | 107 nt | BASIC | -1,51 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22489-201 | ENSMUST00000116813 | 62 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm25184-201 | ENSMUST00000157753 | 163 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24108-201 | ENSMUST00000175495 | 77 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir6961-201 | ENSMUST00000183874 | 67 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir7094-2-201 | ENSMUST00000184622 | 60 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir7094-1-201 | ENSMUST00000199671 | 60 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm26447-201 | ENSMUST00000082448 | 129 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm25186-201 | ENSMUST00000083909 | 108 nt | BASIC | -1,52 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Mir574-201 | ENSMUST00000103854 | 78 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm11420-201 | ENSMUST00000120047 | 402 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22720-201 | ENSMUST00000122710 | 87 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm27749-201 | ENSMUST00000183651 | 125 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm22455-201 | ENSMUST00000082580 | 71 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Snord45b-201 | ENSMUST00000082797 | 71 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24764-201 | ENSMUST00000083686 | 199 nt | BASIC | -1,53 | □□□□□ -2,65 | | |
Ubb | P0CG49 | Gm24372-201 | ENSMUST00000104400 | 110 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm26026-201 | ENSMUST00000122726 | 123 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm22985-201 | ENSMUST00000122754 | 116 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm27747-201 | ENSMUST00000184707 | 85 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm24762-201 | ENSMUST00000083689 | 104 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm24704-201 | ENSMUST00000093715 | 107 nt | BASIC | -1,54 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm45741-201 | ENSMUST00000212661 | 152 nt | TSL 1 (best) BASIC | -1,55 | □□□□□ -2,66 | | |
Ubb | P0CG49 | RMST_1.1-206 | ENSMUST00000218255 | 309 nt | TSL 3 BASIC | -1,55 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm23406-201 | ENSMUST00000082537 | 122 nt | BASIC | -1,55 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm25879-201 | ENSMUST00000104330 | 107 nt | BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm12748-201 | ENSMUST00000120763 | 504 nt | BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm21830-201 | ENSMUST00000178898 | 135 nt | APPRIS P1 TSL 5 BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | AC153646.2-201 | ENSMUST00000220516 | 109 nt | BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | AC154832.1-201 | ENSMUST00000228928 | 141 nt | BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm25296-201 | ENSMUST00000082566 | 67 nt | BASIC | -1,56 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm10959-201 | ENSMUST00000106431 | 72 nt | APPRIS P1 TSL 5 BASIC | -1,57 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm12815-201 | ENSMUST00000121737 | 135 nt | BASIC | -1,57 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm25108-201 | ENSMUST00000122473 | 78 nt | BASIC | -1,57 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Mir3094-201 | ENSMUST00000175121 | 64 nt | BASIC | -1,57 | □□□□□ -2,66 | | |
Ubb | P0CG49 | AC158982.2-201 | ENSMUST00000226283 | 184 nt | BASIC | -1,58 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm26438-201 | ENSMUST00000082593 | 107 nt | BASIC | -1,58 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Mir302c-201 | ENSMUST00000083548 | 68 nt | BASIC | -1,58 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm11322-201 | ENSMUST00000118095 | 435 nt | BASIC | -1,59 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm27934-201 | ENSMUST00000158795 | 63 nt | BASIC | -1,59 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Tmsb15b2-202 | ENSMUST00000180194 | 243 nt | APPRIS P1 TSL 3 BASIC | -1,59 | □□□□□ -2,66 | | |
Ubb | P0CG49 | AC168880.2-201 | ENSMUST00000224488 | 201 nt | BASIC | -1,59 | □□□□□ -2,66 | | |
Ubb | P0CG49 | Gm23772-201 | ENSMUST00000104433 | 102 nt | BASIC | -1,6 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm14502-201 | ENSMUST00000118154 | 113 nt | BASIC | -1,6 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm26291-201 | ENSMUST00000158889 | 137 nt | BASIC | -1,6 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm23291-201 | ENSMUST00000175611 | 78 nt | BASIC | -1,6 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Mir669p-2-201 | ENSMUST00000103868 | 87 nt | BASIC | -1,61 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Mir669p-1-201 | ENSMUST00000103884 | 87 nt | BASIC | -1,61 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm23900-201 | ENSMUST00000157569 | 108 nt | BASIC | -1,61 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm26401-201 | ENSMUST00000158502 | 76 nt | BASIC | -1,61 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm25111-201 | ENSMUST00000116686 | 147 nt | BASIC | -1,62 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm26279-201 | ENSMUST00000157095 | 102 nt | BASIC | -1,62 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm23080-201 | ENSMUST00000157846 | 103 nt | BASIC | -1,62 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm22732-201 | ENSMUST00000158093 | 121 nt | BASIC | -1,62 | □□□□□ -2,67 | | |
Ubb | P0CG49 | AC124739.2-201 | ENSMUST00000222201 | 109 nt | BASIC | -1,63 | □□□□□ -2,67 | | |
Ubb | P0CG49 | AC165157.3-201 | ENSMUST00000220815 | 103 nt | BASIC | -1,64 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm24377-201 | ENSMUST00000104398 | 131 nt | BASIC | -1,65 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm24729-201 | ENSMUST00000158225 | 137 nt | BASIC | -1,65 | □□□□□ -2,67 | | |
Ubb | P0CG49 | Gm37796-201 | ENSMUST00000195327 | 134 nt | BASIC | -1,65 | □□□□□ -2,67 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 103,2 ms