Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Trbv25-201ENSMUST00000194700 273 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Gm45754-201ENSMUST00000212380 279 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Gm25788-201ENSMUST00000082721 131 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Mir300-201ENSMUST00000083485 79 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Snord80-201ENSMUST00000083801 81 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Gm27365-201ENSMUST00000184041 177 ntBASIC1.32□□□□□ -2.2
Col3a1P08121 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.32□□□□□ -2.2
Col3a1P08121 Gm24151-201ENSMUST00000082758 141 ntBASIC1.32□□□□□ -2.2
Col3a1P08121 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col3a1P08121 Gm22067-201ENSMUST00000122790 107 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm25329-201ENSMUST00000158041 126 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm24880-201ENSMUST00000158776 85 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm24333-201ENSMUST00000175101 84 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Mir6388-201ENSMUST00000184417 75 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm42935-201ENSMUST00000202004 151 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.31□□□□□ -2.2
Col3a1P08121 Mir34c-201ENSMUST00000083653 77 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm25611-201ENSMUST00000104017 133 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm23708-201ENSMUST00000104367 123 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm26089-201ENSMUST00000157898 107 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm23008-201ENSMUST00000158946 80 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm22503-201ENSMUST00000158983 115 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm16550-201ENSMUST00000162550 126 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm27722-201ENSMUST00000183908 76 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm44462-201ENSMUST00000199696 129 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm24805-201ENSMUST00000082931 104 ntBASIC1.31□□□□□ -2.2
Col3a1P08121 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 Mir1950-201ENSMUST00000158526 74 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 Gm25241-201ENSMUST00000174909 84 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 Gm26217-201ENSMUST00000175212 84 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 Gm23917-201ENSMUST00000175256 98 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 Gm26441-201ENSMUST00000082590 104 ntBASIC1.3□□□□□ -2.2
Col3a1P08121 U6.1-201ENSMUST00000157443 101 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Gm23996-201ENSMUST00000158062 131 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Gm23065-201ENSMUST00000158236 130 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Gm22425-201ENSMUST00000158532 138 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Gm26213-201ENSMUST00000158582 110 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Gm25750-201ENSMUST00000175483 112 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.29□□□□□ -2.2
Col3a1P08121 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Col3a1P08121 Gm23991-201ENSMUST00000117033 93 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Gm23656-201ENSMUST00000122626 112 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Gm25011-201ENSMUST00000158398 126 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Gm20477-201ENSMUST00000174028 280 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Gm21885-201ENSMUST00000178891 327 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Snora3-201ENSMUST00000083082 132 ntBASIC1.28□□□□□ -2.2
Col3a1P08121 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
Col3a1P08121 Mir1187-201ENSMUST00000116936 122 ntBASIC1.27□□□□□ -2.21
Col3a1P08121 Gm26369-201ENSMUST00000157825 100 ntBASIC1.27□□□□□ -2.21
Col3a1P08121 Gm23375-201ENSMUST00000175407 83 ntBASIC1.27□□□□□ -2.21
Col3a1P08121 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.27□□□□□ -2.21
Col3a1P08121 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Col3a1P08121 Gm23468-201ENSMUST00000157125 108 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Gm24637-201ENSMUST00000158674 85 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Gm24677-201ENSMUST00000158755 150 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Gm20108-201ENSMUST00000219977 153 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Gm24412-201ENSMUST00000083426 109 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.26□□□□□ -2.21
Col3a1P08121 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Col3a1P08121 Gm15654-201ENSMUST00000152660 300 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Gm20391-201ENSMUST00000174722 106 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Gm25229-201ENSMUST00000178587 79 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Gm27415-201ENSMUST00000183720 95 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Gm27639-201ENSMUST00000184937 85 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Gm3702-201ENSMUST00000211754 346 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.25□□□□□ -2.21
Col3a1P08121 Mir764-201ENSMUST00000103259 108 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm22677-201ENSMUST00000116977 108 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm22605-201ENSMUST00000158289 108 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm24222-201ENSMUST00000158834 93 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm16307-201ENSMUST00000161269 210 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm25949-201ENSMUST00000175333 114 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm26398-201ENSMUST00000179015 127 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir6237-201ENSMUST00000183808 91 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col3a1P08121 Gm23056-201ENSMUST00000082803 111 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm22884-201ENSMUST00000083127 140 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm24523-201ENSMUST00000083965 132 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir873a-201ENSMUST00000104863 77 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm25166-201ENSMUST00000158909 111 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.24□□□□□ -2.21
Col3a1P08121 Gm25994-201ENSMUST00000175392 101 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm25618-201ENSMUST00000179484 107 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm27511-201ENSMUST00000183502 127 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir6380-201ENSMUST00000184334 81 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Gm23299-201ENSMUST00000082708 79 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir27b-201ENSMUST00000083541 73 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir107-201ENSMUST00000083660 87 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir151-201ENSMUST00000083678 68 ntBASIC1.24□□□□□ -2.21
Col3a1P08121 Mir20b-201ENSMUST00000102087 80 ntBASIC1.23□□□□□ -2.21
Col3a1P08121 Gm23237-201ENSMUST00000104639 92 ntBASIC1.23□□□□□ -2.21
Col3a1P08121 Gm25061-201ENSMUST00000104665 107 ntBASIC1.23□□□□□ -2.21
Col3a1P08121 Gm16539-201ENSMUST00000160086 327 ntBASIC1.23□□□□□ -2.21
Col3a1P08121 Snord43-201ENSMUST00000199549 108 ntBASIC1.23□□□□□ -2.21
Col3a1P08121 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col3a1P08121 Gm22140-201ENSMUST00000158745 120 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms