Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22196-201ENSMUST00000116865 109 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Gm22031-201ENSMUST00000116945 126 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Gm24894-201ENSMUST00000122744 118 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Mir1961-201ENSMUST00000158643 112 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Gm24221-201ENSMUST00000158833 313 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Scarna3a-201ENSMUST00000158911 140 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Mir6369-201ENSMUST00000183772 106 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Mir6928-201ENSMUST00000185166 70 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Gm45688-201ENSMUST00000210002 101 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 AC124687.1-201ENSMUST00000221868 189 ntBASIC0,44□□□□□ -2,34
Col5a1O88207 Snord69-201ENSMUST00000104024 80 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Mir1899-201ENSMUST00000122798 96 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm23986-201ENSMUST00000157144 63 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm25623-201ENSMUST00000157216 108 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm24246-201ENSMUST00000157315 132 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm26498-201ENSMUST00000177799 79 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm26230-201ENSMUST00000180141 79 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Mir92-2-201ENSMUST00000083679 91 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0,43□□□□□ -2,34
Col5a1O88207 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0,43□□□□□ -2,34
Col5a1O88207 Gm23653-201ENSMUST00000116751 97 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm26274-201ENSMUST00000157103 321 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm23838-201ENSMUST00000158067 162 ntBASIC0,43□□□□□ -2,34
Col5a1O88207 Gm22786-201ENSMUST00000104086 122 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm22451-201ENSMUST00000122803 151 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm25968-201ENSMUST00000157167 100 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm24913-201ENSMUST00000157286 107 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm24842-201ENSMUST00000158681 54 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm24676-201ENSMUST00000158758 75 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0,42□□□□□ -2,34
Col5a1O88207 Gm24020-201ENSMUST00000180156 108 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0,42□□□□□ -2,34
Col5a1O88207 Gm44948-201ENSMUST00000209050 149 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Mir33-201ENSMUST00000083531 69 ntBASIC0,42□□□□□ -2,34
Col5a1O88207 Gm22381-201ENSMUST00000158186 107 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0,41□□□□□ -2,34
Col5a1O88207 Mir3089-201ENSMUST00000175350 84 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm27993-201ENSMUST00000184362 85 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm23138-201ENSMUST00000083365 103 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm12469-201ENSMUST00000117623 207 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm24649-201ENSMUST00000157106 134 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm25329-201ENSMUST00000158041 126 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Mir1933-201ENSMUST00000158930 88 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm25444-201ENSMUST00000158999 113 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Mir21c-201ENSMUST00000184910 78 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm44385-201ENSMUST00000198781 81 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm25812-201ENSMUST00000082751 103 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Mir324-201ENSMUST00000083600 89 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm22753-201ENSMUST00000083657 107 ntBASIC0,41□□□□□ -2,34
Col5a1O88207 Gm23651-201ENSMUST00000116755 120 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Gm14946-201ENSMUST00000119859 296 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Gm23044-201ENSMUST00000157891 100 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Gm23857-201ENSMUST00000158379 111 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Gm26290-201ENSMUST00000158891 145 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Trbv25-201ENSMUST00000194700 273 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Snord60-201ENSMUST00000082834 78 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Gm22681-201ENSMUST00000083853 106 ntBASIC0,4□□□□□ -2,35
Col5a1O88207 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0,39□□□□□ -2,35
Col5a1O88207 Gm25753-201ENSMUST00000116792 121 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 n-R5s6-201ENSMUST00000122663 88 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm23601-201ENSMUST00000157259 131 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm26398-201ENSMUST00000179015 127 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Mir6390-201ENSMUST00000184405 129 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 mt-Tm-201ENSMUST00000082395 69 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm23969-201ENSMUST00000083324 74 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm25006-201ENSMUST00000083813 107 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm24030-201ENSMUST00000083931 164 ntBASIC0,39□□□□□ -2,35
Col5a1O88207 Gm23881-201ENSMUST00000116872 66 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Mir1191-201ENSMUST00000116883 120 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm12086-201ENSMUST00000120863 228 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 n-R5s39-201ENSMUST00000122613 108 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm24549-201ENSMUST00000158647 139 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm22775-201ENSMUST00000177630 120 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm22638-201ENSMUST00000179674 107 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm23569-201ENSMUST00000180120 120 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm25987-201ENSMUST00000083234 107 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm16186-201ENSMUST00000120132 216 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Mir3094-201ENSMUST00000175121 64 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Gm37330-201ENSMUST00000192606 153 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0,38□□□□□ -2,35
Col5a1O88207 mt-Tv-201ENSMUST00000082389 69 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Snora41-201ENSMUST00000082668 132 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Mir377-201ENSMUST00000083504 68 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Mir216a-201ENSMUST00000083605 72 ntBASIC0,38□□□□□ -2,35
Col5a1O88207 Scarna9-201ENSMUST00000104318 70 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm24509-201ENSMUST00000157086 101 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm25358-201ENSMUST00000157189 101 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm24903-201ENSMUST00000158131 126 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm23763-201ENSMUST00000158345 60 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm10548-202ENSMUST00000165672 272 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Mir100-201ENSMUST00000175270 80 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Mir6364-201ENSMUST00000183396 86 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm44828-201ENSMUST00000203745 106 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm26202-201ENSMUST00000082910 65 ntBASIC0,37□□□□□ -2,35
Col5a1O88207 Gm25138-201ENSMUST00000083248 136 ntBASIC0,37□□□□□ -2,35
Retrieved 100 of 76,532 protein–RNA pairs in 114,7 ms