Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm25163-201ENSMUST00000158905 104 ntBASIC-2.34□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm25634-201ENSMUST00000082667 105 ntBASIC-2.34□□□□□ -2.78
Trav4-3A0A0B4J1K1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm12924-201ENSMUST00000121747 318 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm22335-201ENSMUST00000157724 99 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm24315-201ENSMUST00000177835 127 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm27446-201ENSMUST00000183963 89 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm28849-201ENSMUST00000188127 174 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25579-201ENSMUST00000083407 106 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Mir23a-201ENSMUST00000083677 75 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.35□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm23320-201ENSMUST00000104462 127 ntBASIC-2.36□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm24913-201ENSMUST00000157286 107 ntBASIC-2.36□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm23025-201ENSMUST00000158769 111 ntBASIC-2.36□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm22784-201ENSMUST00000104088 132 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm23819-201ENSMUST00000158744 109 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm45402-201ENSMUST00000211796 223 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.37□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm13797-201ENSMUST00000121792 120 ntBASIC-2.38□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm24198-201ENSMUST00000157812 108 ntBASIC-2.38□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm22166-201ENSMUST00000178419 121 ntBASIC-2.38□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm23288-201ENSMUST00000179213 121 ntBASIC-2.38□□□□□ -2.79
Trav4-3A0A0B4J1K1 AC134601.1-201ENSMUST00000221058 109 ntBASIC-2.38□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm22539-201ENSMUST00000158167 117 ntBASIC-2.39□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm17919-201ENSMUST00000173344 312 ntBASIC-2.39□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25314-201ENSMUST00000178810 79 ntBASIC-2.39□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25870-201ENSMUST00000179845 79 ntBASIC-2.39□□□□□ -2.79
Trav4-3A0A0B4J1K1 AC132918.1-201ENSMUST00000227877 925 ntBASIC-2.39□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm22791-201ENSMUST00000157232 145 ntBASIC-2.4□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm24725-201ENSMUST00000158229 125 ntBASIC-2.4□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.4□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm24918-201ENSMUST00000083022 130 ntBASIC-2.4□□□□□ -2.79
Trav4-3A0A0B4J1K1 Gm23494-201ENSMUST00000116830 126 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm37832-201ENSMUST00000118935 189 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm26160-201ENSMUST00000158965 63 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm22406-201ENSMUST00000174923 93 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm22454-201ENSMUST00000082583 107 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.41□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm27659-201ENSMUST00000183472 98 ntBASIC-2.42□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm25899-201ENSMUST00000082672 141 ntBASIC-2.42□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm26111-201ENSMUST00000083969 106 ntBASIC-2.42□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24686-201ENSMUST00000157755 93 ntBASIC-2.43□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm26400-201ENSMUST00000175012 85 ntBASIC-2.43□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm23191-201ENSMUST00000179147 107 ntBASIC-2.43□□□□□ -2.8
Trav4-3A0A0B4J1K1 Mir764-201ENSMUST00000103259 108 ntBASIC-2.44□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm23261-201ENSMUST00000158316 136 ntBASIC-2.44□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm23379-201ENSMUST00000180026 107 ntBASIC-2.44□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24856-201ENSMUST00000082809 107 ntBASIC-2.44□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.44□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24701-201ENSMUST00000101946 105 ntBASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm14007-201ENSMUST00000118288 210 ntBASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 AL603630.1-201ENSMUST00000214781 147 ntBASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm25586-201ENSMUST00000082499 112 ntBASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 Rny3-201ENSMUST00000083011 102 ntBASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-2.45□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm23958-201ENSMUST00000157207 105 ntBASIC-2.46□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.46□□□□□ -2.8
Trav4-3A0A0B4J1K1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.46□□□□□ -2.8
Trav4-3A0A0B4J1K1 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.46□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.46□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.47□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24374-201ENSMUST00000104394 106 ntBASIC-2.47□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm12647-201ENSMUST00000118977 265 ntBASIC-2.47□□□□□ -2.8
Trav4-3A0A0B4J1K1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-2.47□□□□□ -2.8
Trav4-3A0A0B4J1K1 Gm24202-201ENSMUST00000082948 103 ntBASIC-2.47□□□□□ -2.8
Trav4-3A0A0B4J1K1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm6897-201ENSMUST00000117714 138 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm14758-201ENSMUST00000119104 138 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm24399-201ENSMUST00000157869 74 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 AC154390.1-201ENSMUST00000225629 277 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm23448-201ENSMUST00000083151 104 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm22578-201ENSMUST00000083730 107 ntBASIC-2.48□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm24232-201ENSMUST00000104314 132 ntBASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm26369-201ENSMUST00000157825 100 ntBASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm22212-201ENSMUST00000158096 106 ntBASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 AC192091.2-201ENSMUST00000217869 117 ntBASIC-2.5□□□□□ -2.81
Trav4-3A0A0B4J1K1 Mir702-201ENSMUST00000102285 109 ntBASIC-2.51□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm22850-201ENSMUST00000157714 82 ntBASIC-2.51□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm25014-201ENSMUST00000158401 103 ntBASIC-2.51□□□□□ -2.81
Trav4-3A0A0B4J1K1 AC165157.3-201ENSMUST00000220815 103 ntBASIC-2.51□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm24047-201ENSMUST00000102405 104 ntBASIC-2.52□□□□□ -2.81
Trav4-3A0A0B4J1K1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-2.52□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm28011-201ENSMUST00000184097 175 ntBASIC-2.52□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
Trav4-3A0A0B4J1K1 Mir3094-201ENSMUST00000175121 64 ntBASIC-2.53□□□□□ -2.81
Trav4-3A0A0B4J1K1 Mir186-201ENSMUST00000083497 71 ntBASIC-2.53□□□□□ -2.81
Trav4-3A0A0B4J1K1 Gm22984-201ENSMUST00000122751 122 ntBASIC-2.54□□□□□ -2.82
Trav4-3A0A0B4J1K1 Gm22446-201ENSMUST00000180108 104 ntBASIC-2.54□□□□□ -2.82
Trav4-3A0A0B4J1K1 Gm16362-201ENSMUST00000135189 214 ntBASIC-2.55□□□□□ -2.82
Trav4-3A0A0B4J1K1 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.55□□□□□ -2.82
Trav4-3A0A0B4J1K1 Gm23500-201ENSMUST00000157735 98 ntBASIC-2.55□□□□□ -2.82
Trav4-3A0A0B4J1K1 AC166358.7-201ENSMUST00000221132 108 ntBASIC-2.55□□□□□ -2.82
Trav4-3A0A0B4J1K1 AC116589.3-202ENSMUST00000221770 649 ntBASIC-2.55□□□□□ -2.82
Trav4-3A0A0B4J1K1 AC116589.6-201ENSMUST00000222252 649 ntBASIC-2.55□□□□□ -2.82
Retrieved 100 of 76,532 protein–RNA pairs in 217.5 ms