Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.06□□□□□ -2.4
Upk3aQ9JKX8 Gm23258-201ENSMUST00000158319 106 ntBASIC0.06□□□□□ -2.4
Upk3aQ9JKX8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Upk3aQ9JKX8 Gm27285-201ENSMUST00000183875 127 ntBASIC0.06□□□□□ -2.4
Upk3aQ9JKX8 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.06□□□□□ -2.4
Upk3aQ9JKX8 Gm26156-201ENSMUST00000116999 123 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm13065-201ENSMUST00000119178 141 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm25329-201ENSMUST00000158041 126 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm23821-201ENSMUST00000158738 106 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm27332-201ENSMUST00000184893 112 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Mir376b-201ENSMUST00000195930 82 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Mir6375-201ENSMUST00000197176 95 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Gm23347-201ENSMUST00000083823 82 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Mir488-201ENSMUST00000093595 109 ntBASIC0.05□□□□□ -2.4
Upk3aQ9JKX8 Mir670-201ENSMUST00000102380 100 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Gm25408-201ENSMUST00000104104 133 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Gm18665-201ENSMUST00000189783 270 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Mir466e-201ENSMUST00000198862 84 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.04□□□□□ -2.4
Upk3aQ9JKX8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Gm24223-201ENSMUST00000158827 90 ntBASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Mir3094-201ENSMUST00000175121 64 ntBASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Mir8107-201ENSMUST00000184024 117 ntBASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Gm22303-201ENSMUST00000082686 122 ntBASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Gm25482-201ENSMUST00000083225 107 ntBASIC0.03□□□□□ -2.4
Upk3aQ9JKX8 Gm24232-201ENSMUST00000104314 132 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm23901-201ENSMUST00000157570 107 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm38208-201ENSMUST00000192476 114 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm42935-201ENSMUST00000202004 151 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm23140-201ENSMUST00000082487 107 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Snora75-201ENSMUST00000082903 133 ntBASIC0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm23531-201ENSMUST00000104567 68 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm25600-201ENSMUST00000158357 106 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm25247-201ENSMUST00000175475 90 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm27792-201ENSMUST00000184031 115 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm27465-201ENSMUST00000184290 91 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Snord80-202ENSMUST00000199023 77 ntBASIC0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm23320-201ENSMUST00000104462 127 ntBASIC0□□□□□ -2.41
Upk3aQ9JKX8 Gm44345-201ENSMUST00000199560 135 ntBASIC0□□□□□ -2.41
Upk3aQ9JKX8 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Upk3aQ9JKX8 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.01□□□□□ -2.41
Upk3aQ9JKX8 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Mir18-201ENSMUST00000083469 96 ntBASIC-0.02□□□□□ -2.41
Upk3aQ9JKX8 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22258-201ENSMUST00000177645 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm26032-201ENSMUST00000178535 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm25210-201ENSMUST00000178813 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm25157-201ENSMUST00000178914 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22046-201ENSMUST00000179027 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22941-201ENSMUST00000179630 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm25471-201ENSMUST00000180126 94 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.03□□□□□ -2.41
Upk3aQ9JKX8 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.04□□□□□ -2.42
Upk3aQ9JKX8 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.05□□□□□ -2.42
Upk3aQ9JKX8 Snord61-201ENSMUST00000083176 71 ntBASIC-0.05□□□□□ -2.42
Upk3aQ9JKX8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.05□□□□□ -2.42
Upk3aQ9JKX8 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm28724-201ENSMUST00000186149 625 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.06□□□□□ -2.42
Upk3aQ9JKX8 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.07□□□□□ -2.42
Upk3aQ9JKX8 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.07□□□□□ -2.42
Upk3aQ9JKX8 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.08□□□□□ -2.42
Upk3aQ9JKX8 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms