Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm28862-201ENSMUST00000188246 163 ntBASIC1.98□□□□□ -2.09
Trim39Q9ESN2 Snora69-201ENSMUST00000083708 131 ntBASIC1.98□□□□□ -2.09
Trim39Q9ESN2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Mir1899-201ENSMUST00000122798 96 ntBASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.97□□□□□ -2.09
Trim39Q9ESN2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Gm25402-201ENSMUST00000082966 131 ntBASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Gm25650-201ENSMUST00000083784 162 ntBASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.97□□□□□ -2.09
Trim39Q9ESN2 Mir544-201ENSMUST00000103813 78 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm23528-201ENSMUST00000104571 132 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Mir669d-201ENSMUST00000104644 121 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm25529-201ENSMUST00000104850 92 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm11694-201ENSMUST00000118637 159 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm24770-201ENSMUST00000158505 92 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm27987-201ENSMUST00000184023 93 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm27399-201ENSMUST00000184250 78 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm25854-201ENSMUST00000082792 72 ntBASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trim39Q9ESN2 Gm25542-201ENSMUST00000116889 94 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm22732-201ENSMUST00000158093 121 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm22093-201ENSMUST00000158980 111 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm23293-201ENSMUST00000082552 104 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm23100-201ENSMUST00000083455 141 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm25629-201ENSMUST00000084001 107 ntBASIC1.95□□□□□ -2.1
Trim39Q9ESN2 Gm24183-201ENSMUST00000122572 93 ntBASIC1.94□□□□□ -2.1
Trim39Q9ESN2 Mir6995-201ENSMUST00000183658 71 ntBASIC1.94□□□□□ -2.1
Trim39Q9ESN2 Gm44602-201ENSMUST00000205948 132 ntBASIC1.94□□□□□ -2.1
Trim39Q9ESN2 Gm25636-201ENSMUST00000082666 133 ntBASIC1.94□□□□□ -2.1
Trim39Q9ESN2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trim39Q9ESN2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trim39Q9ESN2 Gm23482-201ENSMUST00000104172 122 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm24984-201ENSMUST00000104454 133 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm12469-201ENSMUST00000117623 207 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm26478-201ENSMUST00000122611 133 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm22522-201ENSMUST00000158271 151 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm22159-201ENSMUST00000158412 130 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 Gm44477-201ENSMUST00000199661 110 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.92□□□□□ -2.1
Trim39Q9ESN2 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm23237-201ENSMUST00000104639 92 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm24686-201ENSMUST00000157755 93 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm24728-201ENSMUST00000158226 125 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm22887-201ENSMUST00000178586 107 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm25740-201ENSMUST00000180247 107 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm24151-201ENSMUST00000082758 141 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm24162-201ENSMUST00000093665 102 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.91□□□□□ -2.1
Trim39Q9ESN2 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim39Q9ESN2 Gm24783-201ENSMUST00000157639 100 ntBASIC1.9□□□□□ -2.11
Trim39Q9ESN2 Gm22539-201ENSMUST00000158167 117 ntBASIC1.9□□□□□ -2.11
Trim39Q9ESN2 Gm23963-201ENSMUST00000179603 77 ntBASIC1.9□□□□□ -2.11
Trim39Q9ESN2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.9□□□□□ -2.11
Trim39Q9ESN2 Snord60-201ENSMUST00000082834 78 ntBASIC1.9□□□□□ -2.11
Trim39Q9ESN2 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Gm24237-201ENSMUST00000157790 132 ntBASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Gm25035-201ENSMUST00000175414 77 ntBASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Gm23419-201ENSMUST00000175523 84 ntBASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Snord1a-201ENSMUST00000083160 74 ntBASIC1.89□□□□□ -2.11
Trim39Q9ESN2 Gm23881-201ENSMUST00000116872 66 ntBASIC1.88□□□□□ -2.11
Trim39Q9ESN2 Gm25901-201ENSMUST00000158494 130 ntBASIC1.88□□□□□ -2.11
Trim39Q9ESN2 Mir3092-201ENSMUST00000174954 96 ntBASIC1.88□□□□□ -2.11
Trim39Q9ESN2 Gm22809-201ENSMUST00000082743 156 ntBASIC1.88□□□□□ -2.11
Trim39Q9ESN2 Mir29a-201ENSMUST00000083676 88 ntBASIC1.88□□□□□ -2.11
Trim39Q9ESN2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Gm24988-201ENSMUST00000104460 121 ntBASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Gm23761-201ENSMUST00000158347 104 ntBASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Snord7-201ENSMUST00000083781 97 ntBASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.87□□□□□ -2.11
Trim39Q9ESN2 Gm25417-201ENSMUST00000104212 131 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm22544-201ENSMUST00000104349 127 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Mir344e-201ENSMUST00000104677 66 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm6444-201ENSMUST00000119611 458 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm25663-201ENSMUST00000157698 135 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm25460-201ENSMUST00000157954 127 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm26038-201ENSMUST00000158151 106 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm28435-201ENSMUST00000185496 108 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm29047-201ENSMUST00000189816 108 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm44948-201ENSMUST00000209050 149 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim39Q9ESN2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Mir223-201ENSMUST00000102112 110 ntBASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Gm25322-201ENSMUST00000122556 104 ntBASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Gm25056-201ENSMUST00000157372 62 ntBASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Mir6917-201ENSMUST00000184111 61 ntBASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim39Q9ESN2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trim39Q9ESN2 Gm25094-201ENSMUST00000103992 131 ntBASIC1.84□□□□□ -2.11
Trim39Q9ESN2 Gm26342-201ENSMUST00000104557 129 ntBASIC1.84□□□□□ -2.11
Trim39Q9ESN2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.84□□□□□ -2.11
Trim39Q9ESN2 Gm23551-201ENSMUST00000116852 121 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms