Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm22297-201ENSMUST00000083312 106 ntBASIC1.1□□□□□ -2.23
Syne4Q8CII8 Gm10351-201ENSMUST00000087694 125 ntBASIC1.1□□□□□ -2.23
Syne4Q8CII8 Gm25915-201ENSMUST00000104265 126 ntBASIC1.09□□□□□ -2.23
Syne4Q8CII8 Gm25329-201ENSMUST00000158041 126 ntBASIC1.09□□□□□ -2.23
Syne4Q8CII8 Gm26358-201ENSMUST00000158215 97 ntBASIC1.09□□□□□ -2.23
Syne4Q8CII8 Mir1933-201ENSMUST00000158930 88 ntBASIC1.09□□□□□ -2.23
Syne4Q8CII8 Gm38323-201ENSMUST00000192450 210 ntBASIC1.09□□□□□ -2.23
Syne4Q8CII8 Gm15289-201ENSMUST00000117793 244 ntBASIC1.08□□□□□ -2.24
Syne4Q8CII8 Gm16186-201ENSMUST00000120132 216 ntBASIC1.07□□□□□ -2.24
Syne4Q8CII8 Gm10813-201ENSMUST00000099936 90 ntBASIC1.07□□□□□ -2.24
Syne4Q8CII8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Syne4Q8CII8 Gm25444-201ENSMUST00000158999 113 ntBASIC1.06□□□□□ -2.24
Syne4Q8CII8 Mir3079-201ENSMUST00000175428 90 ntBASIC1.06□□□□□ -2.24
Syne4Q8CII8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Syne4Q8CII8 Gm42935-201ENSMUST00000202004 151 ntBASIC1.06□□□□□ -2.24
Syne4Q8CII8 Mir20b-201ENSMUST00000102087 80 ntBASIC1.05□□□□□ -2.24
Syne4Q8CII8 Gm22384-201ENSMUST00000158187 104 ntBASIC1.05□□□□□ -2.24
Syne4Q8CII8 Gm25367-201ENSMUST00000158846 106 ntBASIC1.05□□□□□ -2.24
Syne4Q8CII8 Mir6390-201ENSMUST00000184405 129 ntBASIC1.05□□□□□ -2.24
Syne4Q8CII8 Gm24579-201ENSMUST00000103964 144 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Gm13577-201ENSMUST00000121365 205 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Mir1899-201ENSMUST00000122798 96 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Syne4Q8CII8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.04□□□□□ -2.24
Syne4Q8CII8 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Mir7091-201ENSMUST00000184075 79 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Mir500-201ENSMUST00000093600 92 ntBASIC1.04□□□□□ -2.24
Syne4Q8CII8 Gm25544-201ENSMUST00000122676 120 ntBASIC1.03□□□□□ -2.24
Syne4Q8CII8 Gm22451-201ENSMUST00000122803 151 ntBASIC1.03□□□□□ -2.24
Syne4Q8CII8 Gm24476-201ENSMUST00000157437 131 ntBASIC1.03□□□□□ -2.24
Syne4Q8CII8 Mir15a-201ENSMUST00000175266 84 ntBASIC1.03□□□□□ -2.24
Syne4Q8CII8 Mir7079-201ENSMUST00000184697 69 ntBASIC1.03□□□□□ -2.24
Syne4Q8CII8 Gm25091-201ENSMUST00000103997 71 ntBASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm27587-201ENSMUST00000185116 163 ntBASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.02□□□□□ -2.25
Syne4Q8CII8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Syne4Q8CII8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
Syne4Q8CII8 Gm25623-201ENSMUST00000157216 108 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Gm24288-201ENSMUST00000157630 144 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Gm23783-201ENSMUST00000157941 102 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Snord60-201ENSMUST00000082834 78 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Gm24920-201ENSMUST00000083018 85 ntBASIC1.01□□□□□ -2.25
Syne4Q8CII8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1□□□□□ -2.25
Syne4Q8CII8 Gm25428-201ENSMUST00000157608 114 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Mir6380-201ENSMUST00000184334 81 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Mir219b-201ENSMUST00000198317 65 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Mir30a-201ENSMUST00000083471 71 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Mir33-201ENSMUST00000083531 69 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Snord35a-201ENSMUST00000083884 90 ntBASIC1□□□□□ -2.25
Syne4Q8CII8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Syne4Q8CII8 Snord69-201ENSMUST00000104024 80 ntBASIC0.99□□□□□ -2.25
Syne4Q8CII8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.99□□□□□ -2.25
Syne4Q8CII8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.99□□□□□ -2.25
Syne4Q8CII8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.99□□□□□ -2.25
Syne4Q8CII8 Gm22753-201ENSMUST00000083657 107 ntBASIC0.99□□□□□ -2.25
Syne4Q8CII8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm25425-201ENSMUST00000157611 96 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm24676-201ENSMUST00000158758 75 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm25161-201ENSMUST00000158913 132 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Traj61-201ENSMUST00000165025 72 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm27851-201ENSMUST00000183529 63 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.98□□□□□ -2.25
Syne4Q8CII8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 Gm38298-201ENSMUST00000193578 118 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 Gm26168-201ENSMUST00000083787 112 ntBASIC0.97□□□□□ -2.25
Syne4Q8CII8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.96□□□□□ -2.26
Syne4Q8CII8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.96□□□□□ -2.26
Syne4Q8CII8 Gm24842-201ENSMUST00000158681 54 ntBASIC0.96□□□□□ -2.26
Syne4Q8CII8 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.96□□□□□ -2.26
Syne4Q8CII8 Gm25683-201ENSMUST00000083940 131 ntBASIC0.96□□□□□ -2.26
Syne4Q8CII8 Mir1191-201ENSMUST00000116883 120 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 Gm22708-201ENSMUST00000158987 103 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 Gm8034-201ENSMUST00000178853 132 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.95□□□□□ -2.26
Syne4Q8CII8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.94□□□□□ -2.26
Syne4Q8CII8 Gm24913-201ENSMUST00000157286 107 ntBASIC0.94□□□□□ -2.26
Syne4Q8CII8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms