Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm25859-201ENSMUST00000083710 91 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm25410-201ENSMUST00000083758 137 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm24064-201ENSMUST00000157486 106 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm23900-201ENSMUST00000157569 108 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm23352-201ENSMUST00000158428 64 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm23637-201ENSMUST00000175075 94 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm22638-201ENSMUST00000179674 107 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm22578-201ENSMUST00000083730 107 ntBASIC-1,42□□□□□ -2,64
Col16a1Q8BLX7 Gm14307-201ENSMUST00000118930 291 ntBASIC-1,43□□□□□ -2,64
Col16a1Q8BLX7 Gm37832-201ENSMUST00000118935 189 ntBASIC-1,43□□□□□ -2,64
Col16a1Q8BLX7 Gm14297-201ENSMUST00000129110 291 ntBASIC-1,43□□□□□ -2,64
Col16a1Q8BLX7 Gm27659-201ENSMUST00000183472 98 ntBASIC-1,43□□□□□ -2,64
Col16a1Q8BLX7 Gm44351-201ENSMUST00000200090 95 ntBASIC-1,43□□□□□ -2,64
Col16a1Q8BLX7 Gm25223-201ENSMUST00000158200 110 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Gm29512-201ENSMUST00000185544 315 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Gm38183-201ENSMUST00000193189 205 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Gm44726-201ENSMUST00000203427 217 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Gm23242-201ENSMUST00000083055 107 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Gm26164-201ENSMUST00000083793 104 ntBASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1,44□□□□□ -2,64
Col16a1Q8BLX7 Mir20b-201ENSMUST00000102087 80 ntBASIC-1,45□□□□□ -2,64
Col16a1Q8BLX7 Gm24640-201ENSMUST00000116949 126 ntBASIC-1,45□□□□□ -2,64
Col16a1Q8BLX7 Gm22626-201ENSMUST00000116990 126 ntBASIC-1,45□□□□□ -2,64
Col16a1Q8BLX7 Gm12785-201ENSMUST00000122052 172 ntBASIC-1,45□□□□□ -2,64
Col16a1Q8BLX7 Gm25684-201ENSMUST00000083941 107 ntBASIC-1,45□□□□□ -2,64
Col16a1Q8BLX7 Gm25317-201ENSMUST00000116824 129 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm22606-201ENSMUST00000158290 103 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm24003-201ENSMUST00000158455 100 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm23025-201ENSMUST00000158769 111 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm23571-201ENSMUST00000180073 127 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm38050-201ENSMUST00000191904 238 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm43907-201ENSMUST00000203128 117 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1,46□□□□□ -2,64
Col16a1Q8BLX7 Gm25056-201ENSMUST00000157372 62 ntBASIC-1,47□□□□□ -2,64
Col16a1Q8BLX7 Gm24901-201ENSMUST00000158125 110 ntBASIC-1,47□□□□□ -2,64
Col16a1Q8BLX7 Gm27672-201ENSMUST00000183751 204 ntBASIC-1,47□□□□□ -2,64
Col16a1Q8BLX7 Gm24461-201ENSMUST00000082735 103 ntBASIC-1,47□□□□□ -2,64
Col16a1Q8BLX7 Gm23515-201ENSMUST00000082829 107 ntBASIC-1,47□□□□□ -2,64
Col16a1Q8BLX7 Gm14533-201ENSMUST00000117088 93 ntBASIC-1,47□□□□□ -2,65
Col16a1Q8BLX7 Gm24238-201ENSMUST00000157792 98 ntBASIC-1,47□□□□□ -2,65
Col16a1Q8BLX7 Gm24962-201ENSMUST00000157917 109 ntBASIC-1,47□□□□□ -2,65
Col16a1Q8BLX7 Gm22433-201ENSMUST00000158550 142 ntBASIC-1,47□□□□□ -2,65
Col16a1Q8BLX7 Mir669h-201ENSMUST00000116944 125 ntBASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm22885-201ENSMUST00000157410 107 ntBASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm24223-201ENSMUST00000158827 90 ntBASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm28330-201ENSMUST00000190353 171 ntBASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm23845-201ENSMUST00000083834 152 ntBASIC-1,48□□□□□ -2,65
Col16a1Q8BLX7 Gm43324-201ENSMUST00000197482 289 ntBASIC-1,49□□□□□ -2,65
Col16a1Q8BLX7 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1,49□□□□□ -2,65
Col16a1Q8BLX7 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1,5□□□□□ -2,65
Col16a1Q8BLX7 Gm25875-201ENSMUST00000104323 107 ntBASIC-1,5□□□□□ -2,65
Col16a1Q8BLX7 Gm16362-201ENSMUST00000135189 214 ntBASIC-1,5□□□□□ -2,65
Col16a1Q8BLX7 Mir465d-201ENSMUST00000196314 58 ntBASIC-1,5□□□□□ -2,65
Col16a1Q8BLX7 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1,5□□□□□ -2,65
Col16a1Q8BLX7 Gm22539-201ENSMUST00000158167 117 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm23148-201ENSMUST00000180367 107 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm25142-201ENSMUST00000082698 107 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm25258-201ENSMUST00000083049 107 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm23941-201ENSMUST00000101953 107 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm22051-201ENSMUST00000117002 127 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm14301-201ENSMUST00000120181 324 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm13720-201ENSMUST00000120741 196 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm25870-201ENSMUST00000179845 79 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Mir7657-201ENSMUST00000196051 57 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm25078-201ENSMUST00000082530 107 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Gm23451-201ENSMUST00000083328 122 ntBASIC-1,51□□□□□ -2,65
Col16a1Q8BLX7 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1,52□□□□□ -2,65
Col16a1Q8BLX7 Gm13801-201ENSMUST00000120750 160 ntBASIC-1,52□□□□□ -2,65
Col16a1Q8BLX7 Gm22203-201ENSMUST00000158605 58 ntBASIC-1,52□□□□□ -2,65
Col16a1Q8BLX7 Gm26437-201ENSMUST00000082595 105 ntBASIC-1,52□□□□□ -2,65
Col16a1Q8BLX7 Gm22287-201ENSMUST00000083197 107 ntBASIC-1,52□□□□□ -2,65
Col16a1Q8BLX7 Gm23142-201ENSMUST00000101848 105 ntBASIC-1,53□□□□□ -2,65
Col16a1Q8BLX7 Gm26240-201ENSMUST00000101893 105 ntBASIC-1,53□□□□□ -2,65
Col16a1Q8BLX7 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1,53□□□□□ -2,65
Col16a1Q8BLX7 Gm24198-201ENSMUST00000157812 108 ntBASIC-1,53□□□□□ -2,65
Col16a1Q8BLX7 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1,53□□□□□ -2,65
Col16a1Q8BLX7 Gm11694-201ENSMUST00000118637 159 ntBASIC-1,54□□□□□ -2,66
Col16a1Q8BLX7 Gm25329-201ENSMUST00000158041 126 ntBASIC-1,54□□□□□ -2,66
Col16a1Q8BLX7 Gm24877-201ENSMUST00000158779 116 ntBASIC-1,54□□□□□ -2,66
Col16a1Q8BLX7 Gm22183-201ENSMUST00000175420 73 ntBASIC-1,54□□□□□ -2,66
Col16a1Q8BLX7 Gm43976-201ENSMUST00000203637 235 ntBASIC-1,54□□□□□ -2,66
Col16a1Q8BLX7 Gm25828-201ENSMUST00000157087 95 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm25493-201ENSMUST00000157375 103 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm23566-201ENSMUST00000174907 108 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm25629-201ENSMUST00000084001 107 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Mir494-201ENSMUST00000093632 85 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm23111-201ENSMUST00000122652 105 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm24635-201ENSMUST00000122712 128 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm23291-201ENSMUST00000175611 78 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm25450-201ENSMUST00000179144 107 ntBASIC-1,55□□□□□ -2,66
Col16a1Q8BLX7 Gm18502-201ENSMUST00000218679 199 ntBASIC-1,55□□□□□ -2,66
Retrieved 100 of 76,532 protein–RNA pairs in 94,3 ms