Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Gm25368-201ENSMUST00000158847 131 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Gm25838-201ENSMUST00000158920 120 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Mir6369-201ENSMUST00000183772 106 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Gm28794-201ENSMUST00000185276 136 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Shkbp1Q6P7W2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Mir20b-201ENSMUST00000102087 80 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Mir466l-201ENSMUST00000104866 121 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Gm22200-201ENSMUST00000158614 67 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Gm23714-201ENSMUST00000179259 105 ntBASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Shkbp1Q6P7W2 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 Gm23967-201ENSMUST00000175062 78 ntBASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 Gm23299-201ENSMUST00000082708 79 ntBASIC1.69□□□□□ -2.14
Shkbp1Q6P7W2 Gm15115-201ENSMUST00000121145 264 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Mir3057-201ENSMUST00000175040 91 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Mir5104-201ENSMUST00000175319 94 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Gm23267-201ENSMUST00000178490 132 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Gm28256-201ENSMUST00000188953 139 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Gm28559-201ENSMUST00000190532 139 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Mir30f-201ENSMUST00000196073 92 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.68□□□□□ -2.14
Shkbp1Q6P7W2 Gm24509-201ENSMUST00000157086 101 ntBASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm25358-201ENSMUST00000157189 101 ntBASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm23917-201ENSMUST00000175256 98 ntBASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm21885-201ENSMUST00000178891 327 ntBASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm26398-201ENSMUST00000179015 127 ntBASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.67□□□□□ -2.14
Shkbp1Q6P7W2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Mir764-201ENSMUST00000103259 108 ntBASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Gm25382-201ENSMUST00000157811 97 ntBASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Mir6237-201ENSMUST00000183808 91 ntBASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Gm25038-201ENSMUST00000082928 130 ntBASIC1.66□□□□□ -2.14
Shkbp1Q6P7W2 Gm22403-201ENSMUST00000174919 84 ntBASIC1.65□□□□□ -2.15
Shkbp1Q6P7W2 Gm20118-201ENSMUST00000187207 162 ntBASIC1.65□□□□□ -2.15
Shkbp1Q6P7W2 Gm25899-201ENSMUST00000082672 141 ntBASIC1.65□□□□□ -2.15
Shkbp1Q6P7W2 Mir532-201ENSMUST00000093630 96 ntBASIC1.65□□□□□ -2.15
Shkbp1Q6P7W2 Gm14039-201ENSMUST00000118705 101 ntBASIC1.64□□□□□ -2.15
Shkbp1Q6P7W2 Mir3061-201ENSMUST00000175129 91 ntBASIC1.64□□□□□ -2.15
Shkbp1Q6P7W2 Gm25730-201ENSMUST00000178753 165 ntBASIC1.64□□□□□ -2.15
Shkbp1Q6P7W2 Gm24527-201ENSMUST00000082920 107 ntBASIC1.64□□□□□ -2.15
Shkbp1Q6P7W2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm16307-201ENSMUST00000161269 210 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm25618-201ENSMUST00000179484 107 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm26441-201ENSMUST00000082590 104 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm24151-201ENSMUST00000082758 141 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Mir410-201ENSMUST00000083563 81 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Gm23344-201ENSMUST00000083818 68 ntBASIC1.63□□□□□ -2.15
Shkbp1Q6P7W2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.62□□□□□ -2.15
Shkbp1Q6P7W2 Gm23558-201ENSMUST00000157823 80 ntBASIC1.62□□□□□ -2.15
Shkbp1Q6P7W2 Gm24946-201ENSMUST00000158332 106 ntBASIC1.62□□□□□ -2.15
Shkbp1Q6P7W2 Gm24174-201ENSMUST00000158933 111 ntBASIC1.62□□□□□ -2.15
Shkbp1Q6P7W2 Gm20108-201ENSMUST00000219977 153 ntBASIC1.62□□□□□ -2.15
Shkbp1Q6P7W2 Gm24907-201ENSMUST00000116932 128 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm23468-201ENSMUST00000157125 108 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm25658-201ENSMUST00000158472 128 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm24637-201ENSMUST00000158674 85 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm24575-201ENSMUST00000175502 77 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm27419-201ENSMUST00000184576 109 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm24406-201ENSMUST00000083026 128 ntBASIC1.61□□□□□ -2.15
Shkbp1Q6P7W2 Gm22677-201ENSMUST00000116977 108 ntBASIC1.6□□□□□ -2.15
Shkbp1Q6P7W2 Gm26290-201ENSMUST00000158891 145 ntBASIC1.6□□□□□ -2.15
Shkbp1Q6P7W2 Gm27326-201ENSMUST00000183504 95 ntBASIC1.6□□□□□ -2.15
Shkbp1Q6P7W2 Gm27722-201ENSMUST00000183908 76 ntBASIC1.6□□□□□ -2.15
Shkbp1Q6P7W2 Gm26062-201ENSMUST00000083379 107 ntBASIC1.6□□□□□ -2.15
Shkbp1Q6P7W2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Scarna9-201ENSMUST00000104318 70 ntBASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Gm26358-201ENSMUST00000158215 97 ntBASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Gm22605-201ENSMUST00000158289 108 ntBASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Gm43865-201ENSMUST00000204721 127 ntBASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Gm45754-201ENSMUST00000212380 279 ntBASIC1.59□□□□□ -2.15
Shkbp1Q6P7W2 Gm24805-201ENSMUST00000082931 104 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms