Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 Mir141-201ENSMUST00000083540 72 ntBASIC-0.05□□□□□ -2.42
Nkx3-1P97436 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Mir18-201ENSMUST00000083469 96 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.06□□□□□ -2.42
Nkx3-1P97436 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Snora75-201ENSMUST00000082903 133 ntBASIC-0.07□□□□□ -2.42
Nkx3-1P97436 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.08□□□□□ -2.42
Nkx3-1P97436 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Snord85-201ENSMUST00000083262 73 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Mir363-201ENSMUST00000093598 75 ntBASIC-0.08□□□□□ -2.42
Nkx3-1P97436 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.09□□□□□ -2.42
Nkx3-1P97436 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.1□□□□□ -2.43
Nkx3-1P97436 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 Gm23378-201ENSMUST00000082942 107 ntBASIC-0.11□□□□□ -2.43
Nkx3-1P97436 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Mir327-201ENSMUST00000199328 69 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Mir488-201ENSMUST00000093595 109 ntBASIC-0.12□□□□□ -2.43
Nkx3-1P97436 Mir672-201ENSMUST00000102331 100 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Mir191-201ENSMUST00000196210 74 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Nkx3-1P97436 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.13□□□□□ -2.43
Nkx3-1P97436 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 184.5 ms