Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24676-201ENSMUST00000158758 75 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm24221-201ENSMUST00000158833 313 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm22775-201ENSMUST00000177630 120 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm23569-201ENSMUST00000180120 120 ntBASIC0.97□□□□□ -2.25
NcanP55066 Mir411-201ENSMUST00000083543 82 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm24449-201ENSMUST00000083985 106 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm10351-201ENSMUST00000087694 125 ntBASIC0.97□□□□□ -2.25
NcanP55066 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
NcanP55066 Mir669j-201ENSMUST00000179023 121 ntBASIC0.96□□□□□ -2.26
NcanP55066 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.96□□□□□ -2.26
NcanP55066 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.96□□□□□ -2.26
NcanP55066 Gm26454-201ENSMUST00000082682 107 ntBASIC0.96□□□□□ -2.26
NcanP55066 Mir324-201ENSMUST00000083600 89 ntBASIC0.96□□□□□ -2.26
NcanP55066 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
NcanP55066 Gm26011-201ENSMUST00000104410 104 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22999-201ENSMUST00000157082 88 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22966-201ENSMUST00000157957 129 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23260-201ENSMUST00000158317 172 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23375-201ENSMUST00000175407 83 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm23966-201ENSMUST00000179823 107 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm20118-201ENSMUST00000187207 162 ntBASIC0.95□□□□□ -2.26
NcanP55066 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.95□□□□□ -2.26
NcanP55066 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm25851-201ENSMUST00000082794 107 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm22681-201ENSMUST00000083853 106 ntBASIC0.95□□□□□ -2.26
NcanP55066 Gm25611-201ENSMUST00000104017 133 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm14946-201ENSMUST00000119859 296 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm26091-201ENSMUST00000122704 82 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm25241-201ENSMUST00000174909 84 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm26217-201ENSMUST00000175212 84 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm27851-201ENSMUST00000183529 63 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm43898-201ENSMUST00000204456 424 ntBASIC0.94□□□□□ -2.26
NcanP55066 Snora41-201ENSMUST00000082668 132 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm23509-201ENSMUST00000083080 160 ntBASIC0.94□□□□□ -2.26
NcanP55066 Gm22757-201ENSMUST00000102279 96 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23130-201ENSMUST00000104252 74 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23036-201ENSMUST00000157885 99 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm22515-201ENSMUST00000158273 305 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm23763-201ENSMUST00000158345 60 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm16307-201ENSMUST00000161269 210 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm20409-201ENSMUST00000173457 130 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm24167-201ENSMUST00000177733 124 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm24028-201ENSMUST00000178991 124 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm45688-201ENSMUST00000210002 101 ntBASIC0.93□□□□□ -2.26
NcanP55066 Gm22809-201ENSMUST00000082743 156 ntBASIC0.93□□□□□ -2.26
NcanP55066 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NcanP55066 Gm24271-201ENSMUST00000102327 111 ntBASIC0.92□□□□□ -2.26
NcanP55066 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NcanP55066 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
NcanP55066 Gm23253-201ENSMUST00000157441 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm26084-201ENSMUST00000157903 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm22384-201ENSMUST00000158187 104 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm22425-201ENSMUST00000158532 138 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm27446-201ENSMUST00000183963 89 ntBASIC0.92□□□□□ -2.26
NcanP55066 Mir468-201ENSMUST00000197332 78 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm42795-201ENSMUST00000198847 76 ntBASIC0.92□□□□□ -2.26
NcanP55066 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm26123-201ENSMUST00000083363 135 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm24258-201ENSMUST00000083739 133 ntBASIC0.92□□□□□ -2.26
NcanP55066 Gm24401-201ENSMUST00000157868 91 ntBASIC0.91□□□□□ -2.26
NcanP55066 Mir1961-201ENSMUST00000158643 112 ntBASIC0.91□□□□□ -2.26
NcanP55066 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.91□□□□□ -2.26
NcanP55066 Mir3094-201ENSMUST00000175121 64 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm44948-201ENSMUST00000209050 149 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm25683-201ENSMUST00000083940 131 ntBASIC0.91□□□□□ -2.26
NcanP55066 Gm14626-201ENSMUST00000117619 216 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm16186-201ENSMUST00000120132 216 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm22815-201ENSMUST00000157451 62 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24238-201ENSMUST00000157792 98 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24020-201ENSMUST00000180156 108 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mir7077-201ENSMUST00000183991 57 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mir6896-201ENSMUST00000198033 73 ntBASIC0.9□□□□□ -2.27
NcanP55066 Gm24311-201ENSMUST00000082570 104 ntBASIC0.9□□□□□ -2.27
NcanP55066 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.9□□□□□ -2.27
NcanP55066 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
NcanP55066 Gm25920-201ENSMUST00000158307 99 ntBASIC0.89□□□□□ -2.27
NcanP55066 Mir6377-201ENSMUST00000183760 114 ntBASIC0.89□□□□□ -2.27
NcanP55066 Gm44385-201ENSMUST00000198781 81 ntBASIC0.89□□□□□ -2.27
NcanP55066 Gm25812-201ENSMUST00000082751 103 ntBASIC0.89□□□□□ -2.27
NcanP55066 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm22544-201ENSMUST00000104349 127 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm22489-201ENSMUST00000116813 62 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm24718-201ENSMUST00000157521 136 ntBASIC0.88□□□□□ -2.27
NcanP55066 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.88□□□□□ -2.27
NcanP55066 Mir709-201ENSMUST00000102190 88 ntBASIC0.87□□□□□ -2.27
NcanP55066 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NcanP55066 Gm24246-201ENSMUST00000157315 132 ntBASIC0.87□□□□□ -2.27
NcanP55066 Gm44807-201ENSMUST00000206115 154 ntBASIC0.87□□□□□ -2.27
NcanP55066 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms