Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.78□□□□□ -2.53
Col1a1P11087 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Snord123-201ENSMUST00000158692 71 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.79□□□□□ -2.54
Col1a1P11087 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.79□□□□□ -2.54
Col1a1P11087 Mir543-201ENSMUST00000102286 76 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Mir764-201ENSMUST00000103259 108 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
Col1a1P11087 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 AC168880.2-201ENSMUST00000224488 201 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 AC121844.1-201ENSMUST00000218706 137 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Snora19-201ENSMUST00000082962 132 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.8□□□□□ -2.54
Col1a1P11087 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.81□□□□□ -2.54
Col1a1P11087 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm17919-201ENSMUST00000173344 312 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.81□□□□□ -2.54
Col1a1P11087 Mir759-201ENSMUST00000103254 98 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.82□□□□□ -2.54
Col1a1P11087 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm12584-201ENSMUST00000117109 1105 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.83□□□□□ -2.54
Col1a1P11087 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.84□□□□□ -2.54
Col1a1P11087 Gm42935-201ENSMUST00000202004 151 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.84□□□□□ -2.54
Col1a1P11087 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
Col1a1P11087 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm12748-201ENSMUST00000120763 504 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.85□□□□□ -2.55
Col1a1P11087 Gm25586-201ENSMUST00000082499 112 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 180.4 ms