Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Mir20b-201ENSMUST00000102087 80 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 Mir802-201ENSMUST00000103258 97 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 Gm22212-201ENSMUST00000158096 106 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 Gm20118-201ENSMUST00000187207 162 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 Mir532-201ENSMUST00000093630 96 ntBASIC1.56□□□□□ -2.16
Pcdha4O88689 Mir653-201ENSMUST00000102402 85 ntBASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm16265-201ENSMUST00000134558 108 ntBASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm23763-201ENSMUST00000158345 60 ntBASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm25976-201ENSMUST00000158695 130 ntBASIC1.55□□□□□ -2.16
Pcdha4O88689 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm25650-201ENSMUST00000083784 162 ntBASIC1.55□□□□□ -2.16
Pcdha4O88689 Gm26253-201ENSMUST00000122493 103 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm24895-201ENSMUST00000122742 74 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm25663-201ENSMUST00000157698 135 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm24575-201ENSMUST00000175502 77 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm27365-201ENSMUST00000184041 177 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Mir7241-201ENSMUST00000184532 64 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm24099-201ENSMUST00000083384 107 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.54□□□□□ -2.16
Pcdha4O88689 Gm22785-201ENSMUST00000104087 132 ntBASIC1.53□□□□□ -2.16
Pcdha4O88689 Gm14039-201ENSMUST00000118705 101 ntBASIC1.53□□□□□ -2.16
Pcdha4O88689 Gm28794-201ENSMUST00000185276 136 ntBASIC1.53□□□□□ -2.16
Pcdha4O88689 Mir3087-201ENSMUST00000199405 56 ntBASIC1.53□□□□□ -2.16
Pcdha4O88689 Snord80-201ENSMUST00000083801 81 ntBASIC1.53□□□□□ -2.16
Pcdha4O88689 Gm25370-201ENSMUST00000158159 94 ntBASIC1.52□□□□□ -2.17
Pcdha4O88689 Gm22089-201ENSMUST00000158336 102 ntBASIC1.52□□□□□ -2.17
Pcdha4O88689 Mir3083-201ENSMUST00000175377 64 ntBASIC1.52□□□□□ -2.17
Pcdha4O88689 Gm44932-201ENSMUST00000206799 121 ntBASIC1.52□□□□□ -2.17
Pcdha4O88689 Snord96a-201ENSMUST00000082791 81 ntBASIC1.52□□□□□ -2.17
Pcdha4O88689 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Pcdha4O88689 Scarna9-201ENSMUST00000104318 70 ntBASIC1.51□□□□□ -2.17
Pcdha4O88689 Gm26398-201ENSMUST00000179015 127 ntBASIC1.51□□□□□ -2.17
Pcdha4O88689 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.51□□□□□ -2.17
Pcdha4O88689 Gm22251-201ENSMUST00000083216 107 ntBASIC1.51□□□□□ -2.17
Pcdha4O88689 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm25289-201ENSMUST00000122799 119 ntBASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm22503-201ENSMUST00000158983 115 ntBASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm27265-201ENSMUST00000183559 77 ntBASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm25636-201ENSMUST00000082666 133 ntBASIC1.5□□□□□ -2.17
Pcdha4O88689 Gm25022-201ENSMUST00000102205 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Gm24588-201ENSMUST00000116696 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Gm24401-201ENSMUST00000157868 91 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 Gm28767-201ENSMUST00000188601 114 ntBASIC1.49□□□□□ -2.17
Pcdha4O88689 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Pcdha4O88689 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Pcdha4O88689 Gm22706-201ENSMUST00000157907 112 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Gm26358-201ENSMUST00000158215 97 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Gm23065-201ENSMUST00000158236 130 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Gm22887-201ENSMUST00000178586 107 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Trbv25-201ENSMUST00000194700 273 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Gm23038-201ENSMUST00000083873 104 ntBASIC1.48□□□□□ -2.17
Pcdha4O88689 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Pcdha4O88689 Gm23336-201ENSMUST00000117023 123 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 Gm26369-201ENSMUST00000157825 100 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 Gm22944-201ENSMUST00000158662 133 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.47□□□□□ -2.17
Pcdha4O88689 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Pcdha4O88689 Gm25992-201ENSMUST00000102437 109 ntBASIC1.46□□□□□ -2.18
Pcdha4O88689 Mir764-201ENSMUST00000103259 108 ntBASIC1.46□□□□□ -2.18
Pcdha4O88689 Gm22809-201ENSMUST00000082743 156 ntBASIC1.46□□□□□ -2.18
Pcdha4O88689 Gm26109-201ENSMUST00000083970 70 ntBASIC1.46□□□□□ -2.18
Pcdha4O88689 Gm22770-201ENSMUST00000158368 67 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 Gm24223-201ENSMUST00000158827 90 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 Gm26290-201ENSMUST00000158891 145 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 Gm22950-201ENSMUST00000082776 107 ntBASIC1.45□□□□□ -2.18
Pcdha4O88689 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Pcdha4O88689 Gm25759-201ENSMUST00000103988 129 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Mir1191-201ENSMUST00000116883 120 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Gm24915-201ENSMUST00000157288 78 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Gm7258-201ENSMUST00000179317 300 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Gm26466-201ENSMUST00000179615 79 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Mir7009-201ENSMUST00000184519 64 ntBASIC1.44□□□□□ -2.18
Pcdha4O88689 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 183.1 ms