Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm25716-201ENSMUST00000158628 104 ntBASIC0.33□□□□□ -2.36
Cdh16O88338 Gm10548-202ENSMUST00000165672 272 ntBASIC0.33□□□□□ -2.36
Cdh16O88338 Gm25300-201ENSMUST00000175284 84 ntBASIC0.33□□□□□ -2.36
Cdh16O88338 Mir377-201ENSMUST00000083504 68 ntBASIC0.33□□□□□ -2.36
Cdh16O88338 Gm23347-201ENSMUST00000083823 82 ntBASIC0.33□□□□□ -2.36
Cdh16O88338 Gm24232-201ENSMUST00000104314 132 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm22373-201ENSMUST00000104584 89 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm25787-201ENSMUST00000104709 92 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Cdh16O88338 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm22815-201ENSMUST00000157451 62 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm24963-201ENSMUST00000157916 144 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm22431-201ENSMUST00000158545 107 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Mir100-201ENSMUST00000175270 80 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm27446-201ENSMUST00000183963 89 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.32□□□□□ -2.36
Cdh16O88338 Mir7657-201ENSMUST00000196051 57 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 Mir219b-201ENSMUST00000198317 65 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.32□□□□□ -2.36
Cdh16O88338 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm23253-201ENSMUST00000157441 104 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm23783-201ENSMUST00000157941 102 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Mir6342-201ENSMUST00000183870 125 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Trbv25-201ENSMUST00000194700 273 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm18502-201ENSMUST00000218679 199 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm25797-201ENSMUST00000082640 107 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.31□□□□□ -2.36
Cdh16O88338 Gm22105-201ENSMUST00000116734 116 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm26158-201ENSMUST00000158973 119 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm43381-201ENSMUST00000198553 165 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm44828-201ENSMUST00000203745 106 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.3□□□□□ -2.36
Cdh16O88338 Gm24461-201ENSMUST00000082735 103 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm23509-201ENSMUST00000083080 160 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm25894-201ENSMUST00000083458 75 ntBASIC0.3□□□□□ -2.36
Cdh16O88338 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Cdh16O88338 Gm24555-201ENSMUST00000104548 124 ntBASIC0.29□□□□□ -2.36
Cdh16O88338 Gm43749-201ENSMUST00000199345 352 ntBASIC0.29□□□□□ -2.36
Cdh16O88338 Gm42935-201ENSMUST00000202004 151 ntBASIC0.29□□□□□ -2.36
Cdh16O88338 Gm23140-201ENSMUST00000082487 107 ntBASIC0.29□□□□□ -2.36
Cdh16O88338 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Cdh16O88338 Gm25610-201ENSMUST00000104016 129 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Mir1191-201ENSMUST00000116883 120 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm14626-201ENSMUST00000117619 216 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm24238-201ENSMUST00000157792 98 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.28□□□□□ -2.36
Cdh16O88338 Gm43944-201ENSMUST00000205220 120 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm45541-201ENSMUST00000210443 54 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm24527-201ENSMUST00000082920 107 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm23969-201ENSMUST00000083324 74 ntBASIC0.28□□□□□ -2.36
Cdh16O88338 Gm12469-201ENSMUST00000117623 207 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm24750-201ENSMUST00000157843 104 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm24772-201ENSMUST00000158507 110 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm26290-201ENSMUST00000158891 145 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm23337-201ENSMUST00000158959 118 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm16550-201ENSMUST00000162550 126 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm25633-201ENSMUST00000178565 107 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Gm27993-201ENSMUST00000184362 85 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.27□□□□□ -2.37
Cdh16O88338 Gm25814-201ENSMUST00000082754 107 ntBASIC0.27□□□□□ -2.37
Cdh16O88338 Mir20b-201ENSMUST00000102087 80 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm25943-201ENSMUST00000103791 90 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm26091-201ENSMUST00000122704 82 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm22983-201ENSMUST00000158308 104 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm25285-201ENSMUST00000178951 90 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm44455-201ENSMUST00000200061 82 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm25899-201ENSMUST00000082672 141 ntBASIC0.26□□□□□ -2.37
Cdh16O88338 Gm26011-201ENSMUST00000104410 104 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Snord72-201ENSMUST00000104549 81 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Gm22030-201ENSMUST00000116942 63 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Mir1966-201ENSMUST00000158807 108 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Gm22239-201ENSMUST00000175220 103 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Mir7010-201ENSMUST00000183464 63 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Mir7229-201ENSMUST00000197062 53 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Gm44457-201ENSMUST00000198109 76 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Gm44602-201ENSMUST00000205948 132 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Cdh16O88338 Gm22973-201ENSMUST00000083298 191 ntBASIC0.25□□□□□ -2.37
Cdh16O88338 Gm25600-201ENSMUST00000158357 106 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Gm24223-201ENSMUST00000158827 90 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Gm25693-201ENSMUST00000175443 85 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Gm29535-201ENSMUST00000185723 109 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Gm28143-201ENSMUST00000191082 109 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Gm44469-201ENSMUST00000198558 79 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.24□□□□□ -2.37
Cdh16O88338 Mir669b-201ENSMUST00000102172 97 ntBASIC0.23□□□□□ -2.37
Cdh16O88338 Snord90-201ENSMUST00000104568 111 ntBASIC0.23□□□□□ -2.37
Cdh16O88338 Mir1197-201ENSMUST00000117037 120 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms