Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav13d-3J3QMG8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.52□□□□□ -2.33
Trav13d-3J3QMG8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.52□□□□□ -2.33
Trav13d-3J3QMG8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav13d-3J3QMG8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.52□□□□□ -2.33
Trav13d-3J3QMG8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Gm12469-201ENSMUST00000117623 207 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Mir100-201ENSMUST00000175270 80 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Gm26398-201ENSMUST00000179015 127 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Mir448-201ENSMUST00000083516 112 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.51□□□□□ -2.33
Trav13d-3J3QMG8 Gm22469-201ENSMUST00000104118 133 ntBASIC0.5□□□□□ -2.33
Trav13d-3J3QMG8 Gm11248-201ENSMUST00000119568 201 ntBASIC0.5□□□□□ -2.33
Trav13d-3J3QMG8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.5□□□□□ -2.33
Trav13d-3J3QMG8 Gm23340-201ENSMUST00000158955 123 ntBASIC0.5□□□□□ -2.33
Trav13d-3J3QMG8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.5□□□□□ -2.33
Trav13d-3J3QMG8 Mir1191-201ENSMUST00000116883 120 ntBASIC0.49□□□□□ -2.33
Trav13d-3J3QMG8 Gm23253-201ENSMUST00000157441 104 ntBASIC0.49□□□□□ -2.33
Trav13d-3J3QMG8 Gm23857-201ENSMUST00000158379 111 ntBASIC0.49□□□□□ -2.33
Trav13d-3J3QMG8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.49□□□□□ -2.33
Trav13d-3J3QMG8 Mir377-201ENSMUST00000083504 68 ntBASIC0.49□□□□□ -2.33
Trav13d-3J3QMG8 Gm22541-201ENSMUST00000158165 127 ntBASIC0.48□□□□□ -2.33
Trav13d-3J3QMG8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.48□□□□□ -2.33
Trav13d-3J3QMG8 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.48□□□□□ -2.33
Trav13d-3J3QMG8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Mir669b-201ENSMUST00000102172 97 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm26011-201ENSMUST00000104410 104 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm23988-201ENSMUST00000117034 122 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm24718-201ENSMUST00000157521 136 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm24129-201ENSMUST00000158537 97 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.47□□□□□ -2.33
Trav13d-3J3QMG8 Gm24223-201ENSMUST00000158827 90 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm26290-201ENSMUST00000158891 145 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Mir669j-201ENSMUST00000179023 121 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm27699-201ENSMUST00000183553 180 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm43749-201ENSMUST00000199345 352 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Trav13d-3J3QMG8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.45□□□□□ -2.34
Trav13d-3J3QMG8 Gm24141-201ENSMUST00000122776 115 ntBASIC0.45□□□□□ -2.34
Trav13d-3J3QMG8 Gm25976-201ENSMUST00000158695 130 ntBASIC0.45□□□□□ -2.34
Trav13d-3J3QMG8 Gm24263-201ENSMUST00000104059 107 ntBASIC0.44□□□□□ -2.34
Trav13d-3J3QMG8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.44□□□□□ -2.34
Trav13d-3J3QMG8 Gm22451-201ENSMUST00000122803 151 ntBASIC0.44□□□□□ -2.34
Trav13d-3J3QMG8 Gm26084-201ENSMUST00000157903 104 ntBASIC0.44□□□□□ -2.34
Trav13d-3J3QMG8 Gm25629-201ENSMUST00000084001 107 ntBASIC0.44□□□□□ -2.34
Trav13d-3J3QMG8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Gm24246-201ENSMUST00000157315 132 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Gm25060-201ENSMUST00000157374 130 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Gm27943-201ENSMUST00000184844 116 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.43□□□□□ -2.34
Trav13d-3J3QMG8 Snord71-201ENSMUST00000104361 85 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm26091-201ENSMUST00000122704 82 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Traj61-201ENSMUST00000165025 72 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm25693-201ENSMUST00000175443 85 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm22911-201ENSMUST00000177920 107 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm27668-201ENSMUST00000184188 120 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm23722-201ENSMUST00000083002 130 ntBASIC0.42□□□□□ -2.34
Trav13d-3J3QMG8 Gm24290-201ENSMUST00000157634 96 ntBASIC0.41□□□□□ -2.34
Trav13d-3J3QMG8 Gm22520-201ENSMUST00000158269 129 ntBASIC0.41□□□□□ -2.34
Trav13d-3J3QMG8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Trav13d-3J3QMG8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.41□□□□□ -2.34
Trav13d-3J3QMG8 Gm25600-201ENSMUST00000158357 106 ntBASIC0.4□□□□□ -2.35
Trav13d-3J3QMG8 Mir1949-202ENSMUST00000199259 70 ntBASIC0.4□□□□□ -2.35
Trav13d-3J3QMG8 Gm26202-201ENSMUST00000082910 65 ntBASIC0.4□□□□□ -2.35
Trav13d-3J3QMG8 Gm26018-201ENSMUST00000104406 128 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm23260-201ENSMUST00000158317 172 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm22565-201ENSMUST00000175540 69 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm29535-201ENSMUST00000185723 109 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm28143-201ENSMUST00000191082 109 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm25081-201ENSMUST00000082534 108 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.39□□□□□ -2.35
Trav13d-3J3QMG8 Gm22673-201ENSMUST00000104415 131 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm13577-201ENSMUST00000121365 205 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm24717-201ENSMUST00000157522 124 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm25367-201ENSMUST00000158846 106 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Mir376b-201ENSMUST00000195930 82 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm26379-202ENSMUST00000200225 132 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Mir410-201ENSMUST00000083563 81 ntBASIC0.38□□□□□ -2.35
Trav13d-3J3QMG8 Gm13065-201ENSMUST00000119178 141 ntBASIC0.37□□□□□ -2.35
Trav13d-3J3QMG8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.37□□□□□ -2.35
Trav13d-3J3QMG8 Gm45492-201ENSMUST00000211611 288 ntBASIC0.37□□□□□ -2.35
Trav13d-3J3QMG8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.37□□□□□ -2.35
Trav13d-3J3QMG8 Mir10b-201ENSMUST00000083566 68 ntBASIC0.37□□□□□ -2.35
Trav13d-3J3QMG8 Gm42506-201ENSMUST00000202009 150 ntBASIC0.36□□□□□ -2.35
Trav13d-3J3QMG8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.36□□□□□ -2.35
Trav13d-3J3QMG8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.36□□□□□ -2.35
Trav13d-3J3QMG8 Gm25040-201ENSMUST00000103877 66 ntBASIC0.35□□□□□ -2.35
Trav13d-3J3QMG8 Gm25274-201ENSMUST00000104296 135 ntBASIC0.35□□□□□ -2.35
Trav13d-3J3QMG8 Gm12013-201ENSMUST00000121971 155 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms