Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm44909-201ENSMUST00000208756 165 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir706-201ENSMUST00000102262 84 ntBASIC-2.17□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm16356-201ENSMUST00000143300 169 ntBASIC-2.17□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm23291-201ENSMUST00000175611 78 ntBASIC-2.17□□□□□ -2.76
Trav4-3A0A0B4J1K1 Snord16a-201ENSMUST00000083895 99 ntBASIC-2.17□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm24580-201ENSMUST00000103965 131 ntBASIC-2.18□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-2.18□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm38050-201ENSMUST00000191904 238 ntBASIC-2.18□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm42594-201ENSMUST00000199511 246 ntBASIC-2.18□□□□□ -2.76
Trav4-3A0A0B4J1K1 Snord61-201ENSMUST00000083176 71 ntBASIC-2.18□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.19□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm25909-201ENSMUST00000157619 121 ntBASIC-2.19□□□□□ -2.76
Trav4-3A0A0B4J1K1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
Trav4-3A0A0B4J1K1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-2.19□□□□□ -2.76
Trav4-3A0A0B4J1K1 AC192333.1-201ENSMUST00000224573 376 ntBASIC-2.19□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir669h-201ENSMUST00000116944 125 ntBASIC-2.2□□□□□ -2.76
Trav4-3A0A0B4J1K1 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-2.2□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm22079-201ENSMUST00000157592 106 ntBASIC-2.2□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir6957-201ENSMUST00000183708 64 ntBASIC-2.2□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm29665-201ENSMUST00000191457 528 ntBASIC-2.2□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm23567-201ENSMUST00000178005 107 ntBASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm43038-201ENSMUST00000202359 88 ntBASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm24707-201ENSMUST00000082812 107 ntBASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm23451-201ENSMUST00000083328 122 ntBASIC-2.21□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm26293-201ENSMUST00000104170 84 ntBASIC-2.22□□□□□ -2.76
Trav4-3A0A0B4J1K1 Snord100-201ENSMUST00000116836 74 ntBASIC-2.22□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-2.22□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm22305-201ENSMUST00000082690 108 ntBASIC-2.22□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm25859-201ENSMUST00000083710 91 ntBASIC-2.22□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm14574-201ENSMUST00000120644 279 ntBASIC-2.23□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm11388-201ENSMUST00000120908 159 ntBASIC-2.23□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm23352-201ENSMUST00000158428 64 ntBASIC-2.23□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm22790-201ENSMUST00000157229 129 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm26402-201ENSMUST00000158499 113 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm22429-201ENSMUST00000158553 130 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm23474-201ENSMUST00000158884 75 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 AC145736.2-201ENSMUST00000216305 365 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm9973-202ENSMUST00000220926 166 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir16-2-201ENSMUST00000083672 95 ntBASIC-2.24□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir1298-201ENSMUST00000116681 98 ntBASIC-2.25□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm26478-201ENSMUST00000122611 133 ntBASIC-2.25□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm24877-201ENSMUST00000158779 116 ntBASIC-2.25□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir1839-201ENSMUST00000175366 127 ntBASIC-2.25□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm12584-201ENSMUST00000117109 1105 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm23982-201ENSMUST00000157141 106 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm25615-201ENSMUST00000177836 94 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm38213-201ENSMUST00000193203 173 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm29818-201ENSMUST00000218070 165 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 AC192333.2-201ENSMUST00000224771 196 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm24461-201ENSMUST00000082735 103 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm24204-201ENSMUST00000082950 107 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-2.26□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm25429-201ENSMUST00000157607 132 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm22557-201ENSMUST00000157804 102 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm23016-201ENSMUST00000158431 62 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm25235-201ENSMUST00000179933 107 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm43810-201ENSMUST00000201018 232 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm29817-201ENSMUST00000210098 172 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm25404-201ENSMUST00000082970 107 ntBASIC-2.27□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir1966-201ENSMUST00000158807 108 ntBASIC-2.28□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm25024-201ENSMUST00000179667 104 ntBASIC-2.28□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm26180-201ENSMUST00000179942 107 ntBASIC-2.28□□□□□ -2.77
Trav4-3A0A0B4J1K1 AC159896.1-201ENSMUST00000215264 215 ntBASIC-2.28□□□□□ -2.77
Trav4-3A0A0B4J1K1 Mir489-201ENSMUST00000093599 107 ntBASIC-2.28□□□□□ -2.77
Trav4-3A0A0B4J1K1 Gm24517-201ENSMUST00000122560 107 ntBASIC-2.29□□□□□ -2.78
Trav4-3A0A0B4J1K1 Snord123-201ENSMUST00000158692 71 ntBASIC-2.29□□□□□ -2.78
Trav4-3A0A0B4J1K1 AC153526.1-201ENSMUST00000219750 190 ntBASIC-2.29□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.29□□□□□ -2.78
Trav4-3A0A0B4J1K1 Mir190b-201ENSMUST00000104803 80 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm22598-201ENSMUST00000157600 127 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm24901-201ENSMUST00000158125 110 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm22203-201ENSMUST00000158605 58 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm45313-201ENSMUST00000210584 178 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 AC102369.1-201ENSMUST00000218415 373 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm26168-201ENSMUST00000083787 112 ntBASIC-2.3□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm27784-201ENSMUST00000184926 113 ntBASIC-2.31□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm42677-201ENSMUST00000196363 127 ntBASIC-2.31□□□□□ -2.78
Trav4-3A0A0B4J1K1 Mir3535-201ENSMUST00000197651 147 ntBASIC-2.31□□□□□ -2.78
Trav4-3A0A0B4J1K1 Mir496a-201ENSMUST00000093627 79 ntBASIC-2.31□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm23660-201ENSMUST00000178362 79 ntBASIC-2.32□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm24088-201ENSMUST00000179100 79 ntBASIC-2.32□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm37763-201ENSMUST00000193445 120 ntBASIC-2.32□□□□□ -2.78
Trav4-3A0A0B4J1K1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-2.32□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm22298-201ENSMUST00000082662 133 ntBASIC-2.32□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm22051-201ENSMUST00000117002 127 ntBASIC-2.33□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.33□□□□□ -2.78
Trav4-3A0A0B4J1K1 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.33□□□□□ -2.78
Trav4-3A0A0B4J1K1 Mir9-2-201ENSMUST00000083490 72 ntBASIC-2.33□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm23941-201ENSMUST00000101953 107 ntBASIC-2.34□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm24983-201ENSMUST00000104457 69 ntBASIC-2.34□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm25424-201ENSMUST00000157612 58 ntBASIC-2.34□□□□□ -2.78
Trav4-3A0A0B4J1K1 Gm25184-201ENSMUST00000157753 163 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms