Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm22030-201ENSMUST00000116942 63 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm26403-201ENSMUST00000158500 105 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Mir3105-201ENSMUST00000175480 85 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm26426-201ENSMUST00000177866 123 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm22259-201ENSMUST00000178926 107 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm26060-201ENSMUST00000180094 123 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm27717-201ENSMUST00000183933 151 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm27792-201ENSMUST00000184031 115 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm37624-201ENSMUST00000193751 219 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Mir1949-202ENSMUST00000199259 70 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm44922-201ENSMUST00000206690 90 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm45265-201ENSMUST00000210852 2497 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 AC161426.1-201ENSMUST00000214137 286 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm23320-201ENSMUST00000104462 127 ntBASIC0,16□□□□□ -2,38
Trav5-4A0A075B652 Mir1298-201ENSMUST00000116681 98 ntBASIC0,16□□□□□ -2,38
Trav5-4A0A075B652 Mir3094-201ENSMUST00000175121 64 ntBASIC0,16□□□□□ -2,38
Trav5-4A0A075B652 Gm42935-201ENSMUST00000202004 151 ntBASIC0,16□□□□□ -2,38
Trav5-4A0A075B652 Gm25416-201ENSMUST00000104221 107 ntBASIC0,15□□□□□ -2,39
Trav5-4A0A075B652 Gm22348-201ENSMUST00000178674 79 ntBASIC0,15□□□□□ -2,39
Trav5-4A0A075B652 Gm27803-201ENSMUST00000183763 119 ntBASIC0,15□□□□□ -2,39
Trav5-4A0A075B652 Snord61-201ENSMUST00000083176 71 ntBASIC0,15□□□□□ -2,39
Trav5-4A0A075B652 Mir471-201ENSMUST00000093596 67 ntBASIC0,15□□□□□ -2,39
Trav5-4A0A075B652 Mir670-201ENSMUST00000102380 100 ntBASIC0,14□□□□□ -2,39
Trav5-4A0A075B652 Gm24223-201ENSMUST00000158827 90 ntBASIC0,14□□□□□ -2,39
Trav5-4A0A075B652 AC154390.1-201ENSMUST00000225629 277 ntBASIC0,14□□□□□ -2,39
Trav5-4A0A075B652 Mir200b-201ENSMUST00000083615 70 ntBASIC0,14□□□□□ -2,39
Trav5-4A0A075B652 Gm13065-201ENSMUST00000119178 141 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Gm25952-201ENSMUST00000175329 74 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Mir21b-201ENSMUST00000184317 108 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Gm23461-201ENSMUST00000083265 107 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Gm21940-201ENSMUST00000204940 2278 ntBASIC0,13□□□□□ -2,39
Trav5-4A0A075B652 Gm44489-201ENSMUST00000104619 97 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Gm26092-201ENSMUST00000179798 97 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Mir6905-201ENSMUST00000184228 70 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Mir376b-201ENSMUST00000195930 82 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 mt-Td-201ENSMUST00000082404 70 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Mir224-201ENSMUST00000083608 82 ntBASIC0,12□□□□□ -2,39
Trav5-4A0A075B652 Gm25408-201ENSMUST00000104104 133 ntBASIC0,11□□□□□ -2,39
Trav5-4A0A075B652 Gm25600-201ENSMUST00000158357 106 ntBASIC0,11□□□□□ -2,39
Trav5-4A0A075B652 Gm22105-201ENSMUST00000116734 116 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Mir1898-201ENSMUST00000122643 83 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Gm22989-201ENSMUST00000158313 86 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Gm23821-201ENSMUST00000158738 106 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Gm28001-201ENSMUST00000183561 117 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Mir7077-201ENSMUST00000183991 57 ntBASIC0,1□□□□□ -2,39
Trav5-4A0A075B652 Gm24835-201ENSMUST00000116777 111 ntBASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Gm24129-201ENSMUST00000158537 97 ntBASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Gm22303-201ENSMUST00000082686 122 ntBASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Gm23303-201ENSMUST00000082714 152 ntBASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Snora75-201ENSMUST00000082903 133 ntBASIC0,09□□□□□ -2,4
Trav5-4A0A075B652 Gm25040-201ENSMUST00000103877 66 ntBASIC0,08□□□□□ -2,4
Trav5-4A0A075B652 Gm26290-201ENSMUST00000158891 145 ntBASIC0,08□□□□□ -2,4
Trav5-4A0A075B652 Gm22967-201ENSMUST00000157956 239 ntBASIC0,07□□□□□ -2,4
Trav5-4A0A075B652 Gm17020-201ENSMUST00000172274 274 ntBASIC0,07□□□□□ -2,4
Trav5-4A0A075B652 Gm26398-201ENSMUST00000179015 127 ntBASIC0,07□□□□□ -2,4
Trav5-4A0A075B652 Gm26097-201ENSMUST00000179642 93 ntBASIC0,07□□□□□ -2,4
Trav5-4A0A075B652 Mir8107-201ENSMUST00000184024 117 ntBASIC0,07□□□□□ -2,4
Trav5-4A0A075B652 Gm24233-201ENSMUST00000104317 122 ntBASIC0,06□□□□□ -2,4
Trav5-4A0A075B652 Gm25980-201ENSMUST00000157176 218 ntBASIC0,06□□□□□ -2,4
Trav5-4A0A075B652 Gm23761-201ENSMUST00000158347 104 ntBASIC0,06□□□□□ -2,4
Trav5-4A0A075B652 Gm11644-201ENSMUST00000119735 150 ntBASIC0,05□□□□□ -2,4
Trav5-4A0A075B652 Gm22606-201ENSMUST00000158290 103 ntBASIC0,05□□□□□ -2,4
Trav5-4A0A075B652 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0,05□□□□□ -2,4
Trav5-4A0A075B652 Mir1197-201ENSMUST00000117037 120 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Gm25633-201ENSMUST00000178565 107 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Mir8116-201ENSMUST00000184134 97 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Mir219b-201ENSMUST00000198317 65 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Gm24208-201ENSMUST00000082783 135 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Snord95-201ENSMUST00000082846 68 ntBASIC0,04□□□□□ -2,4
Trav5-4A0A075B652 Gm25315-201ENSMUST00000116823 121 ntBASIC0,03□□□□□ -2,4
Trav5-4A0A075B652 Gm23509-201ENSMUST00000083080 160 ntBASIC0,03□□□□□ -2,4
Trav5-4A0A075B652 Gm22652-201ENSMUST00000083207 131 ntBASIC0,03□□□□□ -2,4
Trav5-4A0A075B652 Gm25136-201ENSMUST00000083253 115 ntBASIC0,03□□□□□ -2,4
Trav5-4A0A075B652 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0,03□□□□□ -2,4
Trav5-4A0A075B652 Gm22431-201ENSMUST00000158545 107 ntBASIC0,02□□□□□ -2,41
Trav5-4A0A075B652 Gm25974-201ENSMUST00000158701 94 ntBASIC0,02□□□□□ -2,41
Trav5-4A0A075B652 Gm45197-201ENSMUST00000205288 151 ntBASIC0,02□□□□□ -2,41
Trav5-4A0A075B652 Gm22139-201ENSMUST00000158747 105 ntBASIC0,01□□□□□ -2,41
Trav5-4A0A075B652 Gm14837-201ENSMUST00000119688 206 ntBASIC0□□□□□ -2,41
Trav5-4A0A075B652 Gm44338-201ENSMUST00000198614 110 ntBASIC0□□□□□ -2,41
Trav5-4A0A075B652 Gm23445-201ENSMUST00000082800 107 ntBASIC0□□□□□ -2,41
Trav5-4A0A075B652 Gm26202-201ENSMUST00000082910 65 ntBASIC0□□□□□ -2,41
Trav5-4A0A075B652 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0□□□□□ -2,41
Trav5-4A0A075B652 Gm22368-201ENSMUST00000102416 109 ntBASIC-0,01□□□□□ -2,41
Trav5-4A0A075B652 Gm27694-201ENSMUST00000184740 86 ntBASIC-0,01□□□□□ -2,41
Trav5-4A0A075B652 Gm37545-201ENSMUST00000186512 148 ntBASIC-0,01□□□□□ -2,41
Trav5-4A0A075B652 Mir18-201ENSMUST00000083469 96 ntBASIC-0,01□□□□□ -2,41
Trav5-4A0A075B652 Gm25629-201ENSMUST00000084001 107 ntBASIC-0,01□□□□□ -2,41
Trav5-4A0A075B652 Gm24555-201ENSMUST00000104548 124 ntBASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Gm23253-201ENSMUST00000157441 104 ntBASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Mir7079-201ENSMUST00000184697 69 ntBASIC-0,02□□□□□ -2,41
Trav5-4A0A075B652 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0,02□□□□□ -2,41
Retrieved 100 of 76,532 protein–RNA pairs in 89,7 ms