Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Gm25397-201ENSMUST00000176951 92 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Snord60-201ENSMUST00000082834 78 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Mir377-201ENSMUST00000083504 68 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm24381-201ENSMUST00000122697 104 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm22850-201ENSMUST00000157714 82 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm22332-201ENSMUST00000158072 126 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm24903-201ENSMUST00000158131 126 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm10548-202ENSMUST00000165672 272 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Gm22738-201ENSMUST00000083440 147 ntBASIC0.11□□□□□ -2.39
Lmx1aQ9JKU8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm14001-201ENSMUST00000118847 247 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm23821-201ENSMUST00000158738 106 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm25364-201ENSMUST00000158851 107 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Mir7229-201ENSMUST00000197062 53 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm44345-201ENSMUST00000199560 135 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.1□□□□□ -2.39
Lmx1aQ9JKU8 Gm26158-201ENSMUST00000158973 119 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 Mir6904-201ENSMUST00000183443 67 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 Mir6928-201ENSMUST00000185166 70 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 Mir721-201ENSMUST00000200230 88 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 Gm44807-201ENSMUST00000206115 154 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.09□□□□□ -2.4
Lmx1aQ9JKU8 Gm14626-201ENSMUST00000117619 216 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm22433-201ENSMUST00000158550 142 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm16550-201ENSMUST00000162550 126 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm23003-201ENSMUST00000179948 107 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm44455-201ENSMUST00000200061 82 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm25894-201ENSMUST00000083458 75 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.08□□□□□ -2.4
Lmx1aQ9JKU8 Gm24276-201ENSMUST00000102181 110 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Mir466p-201ENSMUST00000103925 89 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm24278-201ENSMUST00000104239 127 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm24238-201ENSMUST00000157792 98 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm22962-201ENSMUST00000157962 73 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm25749-201ENSMUST00000175485 111 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Mir8107-201ENSMUST00000184024 117 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm44469-201ENSMUST00000198558 79 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Snord95-201ENSMUST00000082846 68 ntBASIC0.07□□□□□ -2.4
Lmx1aQ9JKU8 Gm11936-201ENSMUST00000118323 160 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm22101-201ENSMUST00000157928 103 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm23857-201ENSMUST00000158379 111 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm26360-201ENSMUST00000158872 103 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm38208-201ENSMUST00000192476 114 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm37586-201ENSMUST00000193654 204 ntBASIC0.06□□□□□ -2.4
Lmx1aQ9JKU8 Gm25408-201ENSMUST00000104104 133 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Gm22079-201ENSMUST00000157592 106 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Snora15-201ENSMUST00000177461 131 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Gm27943-201ENSMUST00000184844 116 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Gm5002-201ENSMUST00000207145 223 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Mir201-201ENSMUST00000083470 66 ntBASIC0.05□□□□□ -2.4
Lmx1aQ9JKU8 Gm22612-201ENSMUST00000158293 101 ntBASIC0.04□□□□□ -2.4
Lmx1aQ9JKU8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.04□□□□□ -2.4
Lmx1aQ9JKU8 Mir1949-202ENSMUST00000199259 70 ntBASIC0.04□□□□□ -2.4
Lmx1aQ9JKU8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.04□□□□□ -2.4
Lmx1aQ9JKU8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Gm25610-201ENSMUST00000104016 129 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Gm23545-201ENSMUST00000158205 104 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Mir3105-201ENSMUST00000175480 85 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Gm28001-201ENSMUST00000183561 117 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.03□□□□□ -2.4
Lmx1aQ9JKU8 Gm22541-201ENSMUST00000158165 127 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm20409-201ENSMUST00000173457 130 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm24321-201ENSMUST00000175348 80 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm24761-201ENSMUST00000179589 127 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm37116-201ENSMUST00000195161 147 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Mir3967-201ENSMUST00000198710 68 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Lmx1aQ9JKU8 Gm23772-201ENSMUST00000104433 102 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm25390-201ENSMUST00000157341 103 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm22077-201ENSMUST00000157594 93 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm23080-201ENSMUST00000157846 103 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm25654-201ENSMUST00000158467 88 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm24218-201ENSMUST00000180163 105 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm29535-201ENSMUST00000185723 109 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm28143-201ENSMUST00000191082 109 ntBASIC0.01□□□□□ -2.41
Lmx1aQ9JKU8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 202.1 ms