Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm22140-201ENSMUST00000158745 120 ntBASIC2.12□□□□□ -2.07
Trim39Q9ESN2 Gm3702-201ENSMUST00000211754 346 ntBASIC2.12□□□□□ -2.07
Trim39Q9ESN2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.11□□□□□ -2.07
Trim39Q9ESN2 Gm23763-201ENSMUST00000158345 60 ntBASIC2.11□□□□□ -2.07
Trim39Q9ESN2 Mir1950-201ENSMUST00000158526 74 ntBASIC2.11□□□□□ -2.07
Trim39Q9ESN2 Gm24223-201ENSMUST00000158827 90 ntBASIC2.11□□□□□ -2.07
Trim39Q9ESN2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Gm25061-201ENSMUST00000104665 107 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Gm22403-201ENSMUST00000174919 84 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Gm22914-201ENSMUST00000175195 77 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Gm22802-201ENSMUST00000175621 89 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Gm25899-201ENSMUST00000082672 141 ntBASIC2.1□□□□□ -2.07
Trim39Q9ESN2 Mir1191-201ENSMUST00000116883 120 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm14923-201ENSMUST00000118270 155 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm22517-201ENSMUST00000158265 136 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm23005-201ENSMUST00000158950 136 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm25635-201ENSMUST00000082675 131 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Mir34c-201ENSMUST00000083653 77 ntBASIC2.09□□□□□ -2.07
Trim39Q9ESN2 Gm25376-201ENSMUST00000104340 133 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Mir1187-201ENSMUST00000116936 122 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm14039-201ENSMUST00000118705 101 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm22067-201ENSMUST00000122790 107 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm23469-201ENSMUST00000157131 104 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm24674-201ENSMUST00000179194 104 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.08□□□□□ -2.08
Trim39Q9ESN2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Gm26358-201ENSMUST00000158215 97 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Gm25658-201ENSMUST00000158472 128 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Gm22500-201ENSMUST00000158982 99 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Mir532-201ENSMUST00000093630 96 ntBASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trim39Q9ESN2 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Gm21885-201ENSMUST00000178891 327 ntBASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Mir7021-201ENSMUST00000197026 63 ntBASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Mir410-201ENSMUST00000083563 81 ntBASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim39Q9ESN2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Mir1195-201ENSMUST00000116818 98 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Mir3061-201ENSMUST00000175129 91 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Snora26-201ENSMUST00000175614 121 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Gm22458-201ENSMUST00000082576 107 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Gm25644-201ENSMUST00000083209 107 ntBASIC2.05□□□□□ -2.08
Trim39Q9ESN2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm23715-201ENSMUST00000157354 106 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm25014-201ENSMUST00000158401 103 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm23813-201ENSMUST00000175153 77 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Mir3075-201ENSMUST00000175340 85 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm25730-201ENSMUST00000178753 165 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm27975-201ENSMUST00000184400 101 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm27419-201ENSMUST00000184576 109 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.04□□□□□ -2.08
Trim39Q9ESN2 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.04□□□□□ -2.08
Trim39Q9ESN2 Gm24068-201ENSMUST00000104513 132 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm23172-201ENSMUST00000157160 124 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm24399-201ENSMUST00000157869 74 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm24900-201ENSMUST00000158128 134 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm27415-201ENSMUST00000183720 95 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Mir6925-201ENSMUST00000197857 70 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Mir30d-201ENSMUST00000083503 82 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Mir127-201ENSMUST00000093568 70 ntBASIC2.03□□□□□ -2.08
Trim39Q9ESN2 Gm24384-201ENSMUST00000122693 75 ntBASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Gm28767-201ENSMUST00000188601 114 ntBASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Gm45197-201ENSMUST00000205288 151 ntBASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Gm25696-201ENSMUST00000082900 105 ntBASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Mir5117-201ENSMUST00000083226 84 ntBASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Trim39Q9ESN2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm22494-201ENSMUST00000104495 128 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm22205-201ENSMUST00000122655 71 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm22944-201ENSMUST00000158662 133 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm23056-201ENSMUST00000082803 111 ntBASIC2.01□□□□□ -2.09
Trim39Q9ESN2 Gm25992-201ENSMUST00000102437 109 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Gm16510-201ENSMUST00000153501 249 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Gm23900-201ENSMUST00000157569 108 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Gm25423-201ENSMUST00000157609 107 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Gm27517-201ENSMUST00000184347 236 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Mir7241-201ENSMUST00000184532 64 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Mir497-201ENSMUST00000200557 84 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Snord14a-201ENSMUST00000082807 87 ntBASIC2□□□□□ -2.09
Trim39Q9ESN2 Gm23011-201ENSMUST00000104148 132 ntBASIC1.99□□□□□ -2.09
Trim39Q9ESN2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim39Q9ESN2 Gm26133-201ENSMUST00000157363 100 ntBASIC1.98□□□□□ -2.09
Trim39Q9ESN2 Gm24401-201ENSMUST00000157868 91 ntBASIC1.98□□□□□ -2.09
Trim39Q9ESN2 Gm5900-201ENSMUST00000179862 375 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms