Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm22255-201ENSMUST00000177933 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25146-201ENSMUST00000177976 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25523-201ENSMUST00000178044 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24585-201ENSMUST00000178104 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm22627-201ENSMUST00000178127 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm22912-201ENSMUST00000178242 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24866-201ENSMUST00000178338 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm22524-201ENSMUST00000178357 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25710-201ENSMUST00000178367 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm23575-201ENSMUST00000178406 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24872-201ENSMUST00000178434 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm22449-201ENSMUST00000178924 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24702-201ENSMUST00000178965 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24206-201ENSMUST00000179011 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24528-201ENSMUST00000179164 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm22909-201ENSMUST00000179190 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm26334-201ENSMUST00000179403 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25463-201ENSMUST00000179405 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25742-201ENSMUST00000179530 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25209-201ENSMUST00000179576 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm26392-201ENSMUST00000179661 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25230-201ENSMUST00000179740 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm26434-201ENSMUST00000179778 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm25741-201ENSMUST00000179825 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24759-201ENSMUST00000179827 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24219-201ENSMUST00000179861 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm42795-201ENSMUST00000198847 76 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm23254-201ENSMUST00000097244 79 ntBASIC1.99□□□□□ -2.09
Upf1Q9EPU0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Gm28256-201ENSMUST00000188953 139 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Gm28559-201ENSMUST00000190532 139 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Mir10b-201ENSMUST00000083566 68 ntBASIC1.98□□□□□ -2.09
Upf1Q9EPU0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm23654-201ENSMUST00000116758 126 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm24913-201ENSMUST00000157286 107 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm16550-201ENSMUST00000162550 126 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Mir7079-201ENSMUST00000184697 69 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm23299-201ENSMUST00000082708 79 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm26168-201ENSMUST00000083787 112 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.97□□□□□ -2.09
Upf1Q9EPU0 Gm23469-201ENSMUST00000157131 104 ntBASIC1.96□□□□□ -2.1
Upf1Q9EPU0 Mir196b-201ENSMUST00000083509 85 ntBASIC1.96□□□□□ -2.1
Upf1Q9EPU0 Gm25684-201ENSMUST00000083941 107 ntBASIC1.96□□□□□ -2.1
Upf1Q9EPU0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Upf1Q9EPU0 Gm26421-201ENSMUST00000104279 132 ntBASIC1.95□□□□□ -2.1
Upf1Q9EPU0 Gm25978-201ENSMUST00000158698 90 ntBASIC1.95□□□□□ -2.1
Upf1Q9EPU0 Gm28862-201ENSMUST00000188246 163 ntBASIC1.95□□□□□ -2.1
Upf1Q9EPU0 Mir466-201ENSMUST00000093591 73 ntBASIC1.95□□□□□ -2.1
Upf1Q9EPU0 Gm23783-201ENSMUST00000157941 102 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm26038-201ENSMUST00000158151 106 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm8034-201ENSMUST00000178853 132 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm26456-201ENSMUST00000082831 111 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Gm22055-201ENSMUST00000083388 107 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Snora69-201ENSMUST00000083708 131 ntBASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Upf1Q9EPU0 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm22196-201ENSMUST00000116865 109 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm22082-201ENSMUST00000157587 161 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm24401-201ENSMUST00000157868 91 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm22914-201ENSMUST00000175195 77 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm27365-201ENSMUST00000184041 177 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Snora41-201ENSMUST00000082668 132 ntBASIC1.93□□□□□ -2.1
Upf1Q9EPU0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.92□□□□□ -2.1
Upf1Q9EPU0 Gm24572-201ENSMUST00000175505 88 ntBASIC1.92□□□□□ -2.1
Upf1Q9EPU0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.92□□□□□ -2.1
Upf1Q9EPU0 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.92□□□□□ -2.1
Upf1Q9EPU0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Upf1Q9EPU0 Gm22340-201ENSMUST00000157717 114 ntBASIC1.91□□□□□ -2.1
Upf1Q9EPU0 Gm27511-201ENSMUST00000183502 127 ntBASIC1.91□□□□□ -2.1
Upf1Q9EPU0 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.91□□□□□ -2.1
Upf1Q9EPU0 Gm25987-201ENSMUST00000083234 107 ntBASIC1.91□□□□□ -2.1
Upf1Q9EPU0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.91□□□□□ -2.1
Upf1Q9EPU0 Gm25416-201ENSMUST00000104221 107 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 U6.1-201ENSMUST00000157443 101 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm25444-201ENSMUST00000158999 113 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.9□□□□□ -2.11
Upf1Q9EPU0 Gm24234-201ENSMUST00000104316 107 ntBASIC1.89□□□□□ -2.11
Upf1Q9EPU0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.89□□□□□ -2.11
Upf1Q9EPU0 Gm23106-201ENSMUST00000157554 101 ntBASIC1.89□□□□□ -2.11
Upf1Q9EPU0 Traj61-201ENSMUST00000165025 72 ntBASIC1.89□□□□□ -2.11
Upf1Q9EPU0 Gm42844-201ENSMUST00000200355 112 ntBASIC1.89□□□□□ -2.11
Upf1Q9EPU0 Gm23991-201ENSMUST00000117033 93 ntBASIC1.88□□□□□ -2.11
Upf1Q9EPU0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.88□□□□□ -2.11
Upf1Q9EPU0 Gm22802-201ENSMUST00000175621 89 ntBASIC1.88□□□□□ -2.11
Upf1Q9EPU0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.88□□□□□ -2.11
Upf1Q9EPU0 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.88□□□□□ -2.11
Upf1Q9EPU0 Gm22494-201ENSMUST00000104495 128 ntBASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Gm24509-201ENSMUST00000157086 101 ntBASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Gm25358-201ENSMUST00000157189 101 ntBASIC1.87□□□□□ -2.11
Upf1Q9EPU0 Gm22887-201ENSMUST00000178586 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 310.3 ms