Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm25544-201ENSMUST00000122676 120 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm24509-201ENSMUST00000157086 101 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm25358-201ENSMUST00000157189 101 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm23838-201ENSMUST00000158067 162 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm28862-201ENSMUST00000188246 163 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Gm42935-201ENSMUST00000202004 151 ntBASIC1.8□□□□□ -2.12
Pcdha1Q91Y21 Mir301b-201ENSMUST00000102333 97 ntBASIC1.79□□□□□ -2.12
Pcdha1Q91Y21 Gm25279-201ENSMUST00000122608 133 ntBASIC1.79□□□□□ -2.12
Pcdha1Q91Y21 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.79□□□□□ -2.12
Pcdha1Q91Y21 Gm15654-201ENSMUST00000152660 300 ntBASIC1.79□□□□□ -2.12
Pcdha1Q91Y21 Gm24649-201ENSMUST00000157106 134 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Gm26038-201ENSMUST00000158151 106 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Gm27365-201ENSMUST00000184041 177 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Gm25820-201ENSMUST00000198589 127 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Mir3087-201ENSMUST00000199405 56 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Mir148b-201ENSMUST00000083626 97 ntBASIC1.78□□□□□ -2.12
Pcdha1Q91Y21 Snord78-201ENSMUST00000104032 66 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 Gm25680-201ENSMUST00000116917 126 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 Gm22635-201ENSMUST00000116962 126 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 Gm14923-201ENSMUST00000118270 155 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 Gm25650-201ENSMUST00000083784 162 ntBASIC1.77□□□□□ -2.13
Pcdha1Q91Y21 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Gm11248-201ENSMUST00000119568 201 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Gm22082-201ENSMUST00000157587 161 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Gm24677-201ENSMUST00000158755 150 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Gm24877-201ENSMUST00000158779 116 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Gm16307-201ENSMUST00000161269 210 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Mir6369-201ENSMUST00000183772 106 ntBASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.76□□□□□ -2.13
Pcdha1Q91Y21 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Pcdha1Q91Y21 Gm25832-201ENSMUST00000104140 130 ntBASIC1.75□□□□□ -2.13
Pcdha1Q91Y21 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.75□□□□□ -2.13
Pcdha1Q91Y21 U6.1-201ENSMUST00000157443 101 ntBASIC1.75□□□□□ -2.13
Pcdha1Q91Y21 Gm24947-201ENSMUST00000158334 110 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm23763-201ENSMUST00000158345 60 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm22164-201ENSMUST00000158413 106 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm27511-201ENSMUST00000183502 127 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Mir30f-201ENSMUST00000196073 92 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm24494-201ENSMUST00000083804 81 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Mir532-201ENSMUST00000093630 96 ntBASIC1.74□□□□□ -2.13
Pcdha1Q91Y21 Gm25068-201ENSMUST00000103895 110 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Gm26421-201ENSMUST00000104279 132 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Mir3096-201ENSMUST00000116685 71 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Gm25663-201ENSMUST00000157698 135 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Gm25069-201ENSMUST00000175238 86 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Mir21c-201ENSMUST00000184910 78 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Gm18433-201ENSMUST00000192747 197 ntBASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.73□□□□□ -2.13
Pcdha1Q91Y21 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Pcdha1Q91Y21 Gm25887-201ENSMUST00000157777 84 ntBASIC1.72□□□□□ -2.13
Pcdha1Q91Y21 Gm20118-201ENSMUST00000187207 162 ntBASIC1.72□□□□□ -2.13
Pcdha1Q91Y21 Gm24165-201ENSMUST00000082718 128 ntBASIC1.72□□□□□ -2.13
Pcdha1Q91Y21 Mir20b-201ENSMUST00000102087 80 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 Gm14039-201ENSMUST00000118705 101 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 Gm26181-201ENSMUST00000157687 106 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 Gm23384-201ENSMUST00000158593 103 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.71□□□□□ -2.14
Pcdha1Q91Y21 Gm23986-201ENSMUST00000157144 63 ntBASIC1.7□□□□□ -2.14
Pcdha1Q91Y21 Gm23601-201ENSMUST00000157259 131 ntBASIC1.7□□□□□ -2.14
Pcdha1Q91Y21 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Pcdha1Q91Y21 Gm22809-201ENSMUST00000082743 156 ntBASIC1.7□□□□□ -2.14
Pcdha1Q91Y21 Gm22785-201ENSMUST00000104087 132 ntBASIC1.69□□□□□ -2.14
Pcdha1Q91Y21 Gm24262-201ENSMUST00000157431 144 ntBASIC1.69□□□□□ -2.14
Pcdha1Q91Y21 Gm22887-201ENSMUST00000178586 107 ntBASIC1.69□□□□□ -2.14
Pcdha1Q91Y21 Gm28383-201ENSMUST00000187563 139 ntBASIC1.69□□□□□ -2.14
Pcdha1Q91Y21 Gm22319-201ENSMUST00000157147 122 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm24575-201ENSMUST00000175502 77 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm25936-201ENSMUST00000179952 114 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm45754-201ENSMUST00000212380 279 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Pcdha1Q91Y21 Gm14882-201ENSMUST00000117216 218 ntBASIC1.67□□□□□ -2.14
Pcdha1Q91Y21 Gm22386-201ENSMUST00000158192 129 ntBASIC1.67□□□□□ -2.14
Pcdha1Q91Y21 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.67□□□□□ -2.14
Pcdha1Q91Y21 Mir320-201ENSMUST00000083594 82 ntBASIC1.67□□□□□ -2.14
Pcdha1Q91Y21 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Mir450b-201ENSMUST00000102095 82 ntBASIC1.66□□□□□ -2.14
Pcdha1Q91Y21 Gm26080-201ENSMUST00000104069 131 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 262.6 ms