Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm25358-201ENSMUST00000157189 101 ntBASIC1.7□□□□□ -2.14
Ndc1Q8VCB1 Mir6369-201ENSMUST00000183772 106 ntBASIC1.7□□□□□ -2.14
Ndc1Q8VCB1 Mir21c-201ENSMUST00000184910 78 ntBASIC1.7□□□□□ -2.14
Ndc1Q8VCB1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.7□□□□□ -2.14
Ndc1Q8VCB1 Gm23244-201ENSMUST00000083375 92 ntBASIC1.7□□□□□ -2.14
Ndc1Q8VCB1 Gm11248-201ENSMUST00000119568 201 ntBASIC1.69□□□□□ -2.14
Ndc1Q8VCB1 Gm23106-201ENSMUST00000157554 101 ntBASIC1.69□□□□□ -2.14
Ndc1Q8VCB1 Gm23763-201ENSMUST00000158345 60 ntBASIC1.69□□□□□ -2.14
Ndc1Q8VCB1 Gm23289-201ENSMUST00000175615 108 ntBASIC1.69□□□□□ -2.14
Ndc1Q8VCB1 Gm23986-201ENSMUST00000157144 63 ntBASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Gm23351-201ENSMUST00000158427 125 ntBASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Gm22914-201ENSMUST00000175195 77 ntBASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Snord1a-201ENSMUST00000083160 74 ntBASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Mir532-201ENSMUST00000093630 96 ntBASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Ndc1Q8VCB1 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.67□□□□□ -2.14
Ndc1Q8VCB1 Gm23601-201ENSMUST00000157259 131 ntBASIC1.67□□□□□ -2.14
Ndc1Q8VCB1 Gm16307-201ENSMUST00000161269 210 ntBASIC1.67□□□□□ -2.14
Ndc1Q8VCB1 Gm22929-201ENSMUST00000175517 107 ntBASIC1.67□□□□□ -2.14
Ndc1Q8VCB1 Gm23419-201ENSMUST00000175523 84 ntBASIC1.67□□□□□ -2.14
Ndc1Q8VCB1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Gm27365-201ENSMUST00000184041 177 ntBASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Mir30f-201ENSMUST00000196073 92 ntBASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Gm24524-201ENSMUST00000082925 170 ntBASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ndc1Q8VCB1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.65□□□□□ -2.15
Ndc1Q8VCB1 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.65□□□□□ -2.15
Ndc1Q8VCB1 Mir6995-201ENSMUST00000183658 71 ntBASIC1.65□□□□□ -2.15
Ndc1Q8VCB1 Gm28862-201ENSMUST00000188246 163 ntBASIC1.65□□□□□ -2.15
Ndc1Q8VCB1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.65□□□□□ -2.15
Ndc1Q8VCB1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Mir802-201ENSMUST00000103258 97 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm24575-201ENSMUST00000175502 77 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm25650-201ENSMUST00000083784 162 ntBASIC1.64□□□□□ -2.15
Ndc1Q8VCB1 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.63□□□□□ -2.15
Ndc1Q8VCB1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.63□□□□□ -2.15
Ndc1Q8VCB1 Gm14039-201ENSMUST00000118705 101 ntBASIC1.63□□□□□ -2.15
Ndc1Q8VCB1 Gm43977-201ENSMUST00000203970 189 ntBASIC1.63□□□□□ -2.15
Ndc1Q8VCB1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.63□□□□□ -2.15
Ndc1Q8VCB1 Mir20b-201ENSMUST00000102087 80 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm26253-201ENSMUST00000122493 103 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm25370-201ENSMUST00000158159 94 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm22089-201ENSMUST00000158336 102 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm24677-201ENSMUST00000158755 150 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm27898-201ENSMUST00000183987 80 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.62□□□□□ -2.15
Ndc1Q8VCB1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Scarna9-201ENSMUST00000104318 70 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Gm14923-201ENSMUST00000118270 155 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Gm26038-201ENSMUST00000158151 106 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Gm22429-201ENSMUST00000158553 130 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Gm20118-201ENSMUST00000187207 162 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.61□□□□□ -2.15
Ndc1Q8VCB1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm16265-201ENSMUST00000134558 108 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm25663-201ENSMUST00000157698 135 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm24494-201ENSMUST00000083804 81 ntBASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ndc1Q8VCB1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Gm26379-202ENSMUST00000200225 132 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Snord80-201ENSMUST00000083801 81 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.59□□□□□ -2.15
Ndc1Q8VCB1 Gm26358-201ENSMUST00000158215 97 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm22164-201ENSMUST00000158413 106 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm22944-201ENSMUST00000158662 133 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm22887-201ENSMUST00000178586 107 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Trbv25-201ENSMUST00000194700 273 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm25636-201ENSMUST00000082666 133 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm22809-201ENSMUST00000082743 156 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Gm24099-201ENSMUST00000083384 107 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ndc1Q8VCB1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms