Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Mir6377-201ENSMUST00000183760 114 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 Gm42844-201ENSMUST00000200355 112 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 Gm42506-201ENSMUST00000202009 150 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 Mir369-201ENSMUST00000083627 79 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.69□□□□□ -2.14
Ushbp1Q8R370 Mir654-201ENSMUST00000104787 84 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm22196-201ENSMUST00000116865 109 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm22815-201ENSMUST00000157451 62 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm23375-201ENSMUST00000175407 83 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm22802-201ENSMUST00000175621 89 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm25987-201ENSMUST00000083234 107 ntBASIC1.68□□□□□ -2.14
Ushbp1Q8R370 Gm24894-201ENSMUST00000122744 118 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm25011-201ENSMUST00000158398 126 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm22425-201ENSMUST00000158532 138 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm23340-201ENSMUST00000158955 123 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm16539-201ENSMUST00000160086 327 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm22070-201ENSMUST00000178475 107 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm44962-201ENSMUST00000206460 279 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Mir466-201ENSMUST00000093591 73 ntBASIC1.67□□□□□ -2.14
Ushbp1Q8R370 Gm23122-201ENSMUST00000157645 103 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Gm22164-201ENSMUST00000158413 106 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Gm25241-201ENSMUST00000174909 84 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Gm26217-201ENSMUST00000175212 84 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Gm25646-201ENSMUST00000178527 79 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ushbp1Q8R370 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.65□□□□□ -2.14
Ushbp1Q8R370 Gm24234-201ENSMUST00000104316 107 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm12013-201ENSMUST00000121971 155 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm24913-201ENSMUST00000157286 107 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm23328-201ENSMUST00000157418 132 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Snord13-201ENSMUST00000157627 104 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm28256-201ENSMUST00000188953 139 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm28559-201ENSMUST00000190532 139 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm37330-201ENSMUST00000192606 153 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm24494-201ENSMUST00000083804 81 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.65□□□□□ -2.15
Ushbp1Q8R370 Gm25611-201ENSMUST00000104017 133 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm22213-201ENSMUST00000157564 119 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm23558-201ENSMUST00000157823 80 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm23221-201ENSMUST00000158118 93 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm22200-201ENSMUST00000158614 67 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm25838-201ENSMUST00000158920 120 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm28862-201ENSMUST00000188246 163 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm44458-201ENSMUST00000196594 143 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Gm22509-201ENSMUST00000082775 107 ntBASIC1.64□□□□□ -2.15
Ushbp1Q8R370 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Mir343-201ENSMUST00000102360 75 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm25992-201ENSMUST00000102437 109 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm25610-201ENSMUST00000104016 129 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm22785-201ENSMUST00000104087 132 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm14923-201ENSMUST00000118270 155 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm24915-201ENSMUST00000157288 78 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm23106-201ENSMUST00000157554 101 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm25889-201ENSMUST00000157775 107 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Mir1954-201ENSMUST00000175595 86 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm43324-201ENSMUST00000197482 289 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Snord96a-201ENSMUST00000082791 81 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm25684-201ENSMUST00000083941 107 ntBASIC1.63□□□□□ -2.15
Ushbp1Q8R370 Gm22469-201ENSMUST00000104118 133 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm25663-201ENSMUST00000157698 135 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm22963-201ENSMUST00000157960 91 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Mir3098-201ENSMUST00000175416 87 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm22565-201ENSMUST00000175540 69 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm27493-201ENSMUST00000184128 78 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm44807-201ENSMUST00000206115 154 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.62□□□□□ -2.15
Ushbp1Q8R370 Snora24-201ENSMUST00000174989 130 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25098-201ENSMUST00000177580 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm23356-201ENSMUST00000177610 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24027-201ENSMUST00000177611 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22511-201ENSMUST00000177628 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22630-201ENSMUST00000177781 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm23560-201ENSMUST00000177782 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25462-201ENSMUST00000177833 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm26059-201ENSMUST00000177865 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22255-201ENSMUST00000177933 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25146-201ENSMUST00000177976 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25523-201ENSMUST00000178044 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24585-201ENSMUST00000178104 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22627-201ENSMUST00000178127 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22912-201ENSMUST00000178242 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24866-201ENSMUST00000178338 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22524-201ENSMUST00000178357 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm25710-201ENSMUST00000178367 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm23575-201ENSMUST00000178406 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24872-201ENSMUST00000178434 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22449-201ENSMUST00000178924 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24702-201ENSMUST00000178965 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24206-201ENSMUST00000179011 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm24528-201ENSMUST00000179164 79 ntBASIC1.61□□□□□ -2.15
Ushbp1Q8R370 Gm22909-201ENSMUST00000179190 79 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms