Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Gm24049-201ENSMUST00000102409 100 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Gm26341-201ENSMUST00000104561 134 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Gm25750-201ENSMUST00000175483 112 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Gm26207-201ENSMUST00000082909 104 ntBASIC2.67□□□□□ -1.98
Trim47Q8C0E3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim47Q8C0E3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Gm24399-201ENSMUST00000157869 74 ntBASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Gm25552-201ENSMUST00000158081 91 ntBASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim47Q8C0E3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm25992-201ENSMUST00000102437 109 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm26499-201ENSMUST00000178544 79 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm26096-201ENSMUST00000179084 79 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm27959-201ENSMUST00000185172 111 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm20118-201ENSMUST00000187207 162 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Snord104-201ENSMUST00000083192 70 ntBASIC2.65□□□□□ -1.99
Trim47Q8C0E3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm23551-201ENSMUST00000116852 121 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm23656-201ENSMUST00000122626 112 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm22554-201ENSMUST00000157798 147 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm24575-201ENSMUST00000175502 77 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Mir6369-201ENSMUST00000183772 106 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm28435-201ENSMUST00000185496 108 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm29047-201ENSMUST00000189816 108 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Mir497-201ENSMUST00000200557 84 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 AC160976.1-201ENSMUST00000215092 148 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm25038-201ENSMUST00000082928 130 ntBASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim47Q8C0E3 Gm24223-201ENSMUST00000158827 90 ntBASIC2.63□□□□□ -1.99
Trim47Q8C0E3 Mir6388-201ENSMUST00000184417 75 ntBASIC2.63□□□□□ -1.99
Trim47Q8C0E3 Gm43626-201ENSMUST00000198575 162 ntBASIC2.63□□□□□ -1.99
Trim47Q8C0E3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.63□□□□□ -1.99
Trim47Q8C0E3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.62□□□□□ -1.99
Trim47Q8C0E3 Gm23548-201ENSMUST00000158963 106 ntBASIC2.62□□□□□ -1.99
Trim47Q8C0E3 Gm45197-201ENSMUST00000205288 151 ntBASIC2.62□□□□□ -1.99
Trim47Q8C0E3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.62□□□□□ -1.99
Trim47Q8C0E3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm23900-201ENSMUST00000157569 108 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm43865-201ENSMUST00000204721 127 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm6109-201ENSMUST00000223297 348 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm23377-201ENSMUST00000082943 126 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim47Q8C0E3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm15536-201ENSMUST00000121411 114 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm25901-201ENSMUST00000158494 130 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm16539-201ENSMUST00000160086 327 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm24333-201ENSMUST00000175101 84 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm25996-201ENSMUST00000175393 117 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm23306-201ENSMUST00000179058 105 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm27399-201ENSMUST00000184250 78 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm22884-201ENSMUST00000083127 140 ntBASIC2.6□□□□□ -1.99
Trim47Q8C0E3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Gm24907-201ENSMUST00000116932 128 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Gm26133-201ENSMUST00000157363 100 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Gm25949-201ENSMUST00000175333 114 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Gm25870-201ENSMUST00000179845 79 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 Gm24523-201ENSMUST00000083965 132 ntBASIC2.59□□□□□ -1.99
Trim47Q8C0E3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.59□□□□□ -2
Trim47Q8C0E3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Trim47Q8C0E3 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.59□□□□□ -2
Trim47Q8C0E3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trim47Q8C0E3 Gm23980-201ENSMUST00000157135 158 ntBASIC2.58□□□□□ -2
Trim47Q8C0E3 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.58□□□□□ -2
Trim47Q8C0E3 Snora3-201ENSMUST00000083082 132 ntBASIC2.58□□□□□ -2
Trim47Q8C0E3 Mir221-201ENSMUST00000083488 95 ntBASIC2.58□□□□□ -2
Trim47Q8C0E3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim47Q8C0E3 Mir1191-201ENSMUST00000116883 120 ntBASIC2.57□□□□□ -2
Trim47Q8C0E3 Mir3064-201ENSMUST00000175532 67 ntBASIC2.57□□□□□ -2
Trim47Q8C0E3 Gm22264-201ENSMUST00000178200 107 ntBASIC2.57□□□□□ -2
Trim47Q8C0E3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim47Q8C0E3 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.57□□□□□ -2
Trim47Q8C0E3 Gm24313-201ENSMUST00000082561 133 ntBASIC2.57□□□□□ -2
Trim47Q8C0E3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trim47Q8C0E3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Trim47Q8C0E3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Trim47Q8C0E3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim47Q8C0E3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim47Q8C0E3 Gm24509-201ENSMUST00000157086 101 ntBASIC2.56□□□□□ -2
Trim47Q8C0E3 Gm25358-201ENSMUST00000157189 101 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 332.9 ms