Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm25011-201ENSMUST00000158398 126 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm16307-201ENSMUST00000161269 210 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.22□□□□□ -2.05
Sh3rf1Q69ZI1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Snora3-201ENSMUST00000083082 132 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Mir322-201ENSMUST00000083484 95 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23344-201ENSMUST00000083818 68 ntBASIC2.21□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23826-201ENSMUST00000157394 119 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm20477-201ENSMUST00000174028 280 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Mir3569-201ENSMUST00000185080 58 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm7214-201ENSMUST00000222428 272 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25402-201ENSMUST00000082966 131 ntBASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25044-201ENSMUST00000158603 104 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25618-201ENSMUST00000179484 107 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir7226-201ENSMUST00000184953 60 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25854-201ENSMUST00000082792 72 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Mir410-201ENSMUST00000083563 81 ntBASIC2.19□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25542-201ENSMUST00000116889 94 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm22205-201ENSMUST00000122655 71 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25740-201ENSMUST00000180247 107 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23377-201ENSMUST00000082943 126 ntBASIC2.18□□□□□ -2.06
Sh3rf1Q69ZI1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm11333-201ENSMUST00000119479 148 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm26398-201ENSMUST00000179015 127 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Mir30f-201ENSMUST00000196073 92 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25899-201ENSMUST00000082672 141 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm22884-201ENSMUST00000083127 140 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Mir30d-201ENSMUST00000083503 82 ntBASIC2.17□□□□□ -2.06
Sh3rf1Q69ZI1 Gm24183-201ENSMUST00000122572 93 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25354-201ENSMUST00000179110 105 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25635-201ENSMUST00000082675 131 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm25788-201ENSMUST00000082721 131 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Mir222-201ENSMUST00000083537 79 ntBASIC2.16□□□□□ -2.06
Sh3rf1Q69ZI1 Gm23528-201ENSMUST00000104571 132 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26478-201ENSMUST00000122611 133 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm16539-201ENSMUST00000160086 327 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Mir5117-201ENSMUST00000083226 84 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26062-201ENSMUST00000083379 107 ntBASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sh3rf1Q69ZI1 Mir20b-201ENSMUST00000102087 80 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23203-201ENSMUST00000104374 107 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24384-201ENSMUST00000122693 75 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24064-201ENSMUST00000157486 106 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22539-201ENSMUST00000158167 117 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm26290-201ENSMUST00000158891 145 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm25949-201ENSMUST00000175333 114 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir6369-201ENSMUST00000183772 106 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm3724-201ENSMUST00000197957 349 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24412-201ENSMUST00000083426 109 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Mir221-201ENSMUST00000083488 95 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24523-201ENSMUST00000083965 132 ntBASIC2.14□□□□□ -2.07
Sh3rf1Q69ZI1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm14884-201ENSMUST00000120456 196 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23469-201ENSMUST00000157131 104 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Mir3086-201ENSMUST00000175072 87 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24575-201ENSMUST00000175502 77 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24162-201ENSMUST00000093665 102 ntBASIC2.13□□□□□ -2.07
Sh3rf1Q69ZI1 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22093-201ENSMUST00000158980 111 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm24495-201ENSMUST00000178575 79 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm22253-201ENSMUST00000179870 79 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Gm27979-201ENSMUST00000185126 56 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.12□□□□□ -2.07
Sh3rf1Q69ZI1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms