Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.3□□□□□ -2.46
Trav3-3Q5R1C3 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.3□□□□□ -2.46
Trav3-3Q5R1C3 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.3□□□□□ -2.46
Trav3-3Q5R1C3 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.3□□□□□ -2.46
Trav3-3Q5R1C3 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.3□□□□□ -2.46
Trav3-3Q5R1C3 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.31□□□□□ -2.46
Trav3-3Q5R1C3 Mir881-201ENSMUST00000104844 78 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm37845-201ENSMUST00000194977 355 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.32□□□□□ -2.46
Trav3-3Q5R1C3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.33□□□□□ -2.46
Trav3-3Q5R1C3 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.34□□□□□ -2.46
Trav3-3Q5R1C3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Mir489-201ENSMUST00000093599 107 ntBASIC-0.35□□□□□ -2.47
Trav3-3Q5R1C3 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.36□□□□□ -2.47
Trav3-3Q5R1C3 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.36□□□□□ -2.47
Trav3-3Q5R1C3 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.36□□□□□ -2.47
Trav3-3Q5R1C3 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.36□□□□□ -2.47
Trav3-3Q5R1C3 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.37□□□□□ -2.47
Trav3-3Q5R1C3 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.37□□□□□ -2.47
Trav3-3Q5R1C3 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.37□□□□□ -2.47
Trav3-3Q5R1C3 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.37□□□□□ -2.47
Trav3-3Q5R1C3 Mir672-201ENSMUST00000102331 100 ntBASIC-0.38□□□□□ -2.47
Trav3-3Q5R1C3 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.38□□□□□ -2.47
Trav3-3Q5R1C3 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.38□□□□□ -2.47
Trav3-3Q5R1C3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.38□□□□□ -2.47
Trav3-3Q5R1C3 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.39□□□□□ -2.47
Trav3-3Q5R1C3 Snord19-201ENSMUST00000104609 76 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
Trav3-3Q5R1C3 Mir541-201ENSMUST00000102097 90 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.41□□□□□ -2.48
Trav3-3Q5R1C3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.42□□□□□ -2.48
Trav3-3Q5R1C3 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms