Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm23841-201ENSMUST00000116951 114 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Gm26158-201ENSMUST00000158973 119 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Snord95-201ENSMUST00000082846 68 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.03□□□□□ -2.4
Trav8d-2Q5R1B6 Mir541-201ENSMUST00000102097 90 ntBASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Snord19-201ENSMUST00000104609 76 ntBASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm25015-201ENSMUST00000158400 128 ntBASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm28001-201ENSMUST00000183561 117 ntBASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm25408-201ENSMUST00000104104 133 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm6897-201ENSMUST00000117714 138 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm14758-201ENSMUST00000119104 138 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm15654-201ENSMUST00000152660 300 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Mir6915-201ENSMUST00000198839 69 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm22738-201ENSMUST00000083440 147 ntBASIC0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm24729-201ENSMUST00000158225 137 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Mir3105-201ENSMUST00000175480 85 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm24575-201ENSMUST00000175502 77 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm27476-201ENSMUST00000183366 104 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm44469-201ENSMUST00000198558 79 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm44807-201ENSMUST00000206115 154 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 AC192091.2-201ENSMUST00000217869 117 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 AC165157.3-201ENSMUST00000220815 103 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Trav8d-2Q5R1B6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.01□□□□□ -2.41
Trav8d-2Q5R1B6 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Mir382-201ENSMUST00000083494 76 ntBASIC-0.02□□□□□ -2.41
Trav8d-2Q5R1B6 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.03□□□□□ -2.41
Trav8d-2Q5R1B6 Mir191-201ENSMUST00000196210 74 ntBASIC-0.03□□□□□ -2.41
Trav8d-2Q5R1B6 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Snord82-201ENSMUST00000082889 70 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.04□□□□□ -2.42
Trav8d-2Q5R1B6 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.05□□□□□ -2.42
Trav8d-2Q5R1B6 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.05□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.05□□□□□ -2.42
Trav8d-2Q5R1B6 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.05□□□□□ -2.42
Trav8d-2Q5R1B6 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.05□□□□□ -2.42
Trav8d-2Q5R1B6 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.06□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.06□□□□□ -2.42
Trav8d-2Q5R1B6 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.06□□□□□ -2.42
Trav8d-2Q5R1B6 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.07□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.08□□□□□ -2.42
Trav8d-2Q5R1B6 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.08□□□□□ -2.42
Trav8d-2Q5R1B6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
Trav8d-2Q5R1B6 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Trav8d-2Q5R1B6 Mir672-201ENSMUST00000102331 100 ntBASIC-0.1□□□□□ -2.43
Trav8d-2Q5R1B6 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.1□□□□□ -2.43
Trav8d-2Q5R1B6 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.1□□□□□ -2.43
Trav8d-2Q5R1B6 Mir201-201ENSMUST00000083470 66 ntBASIC-0.1□□□□□ -2.43
Trav8d-2Q5R1B6 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.11□□□□□ -2.43
Trav8d-2Q5R1B6 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 220.4 ms