Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 Gm26194-201ENSMUST00000175036 71 ntBASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.46□□□□□ -2.48
Upf3bQ3ULL6 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.47□□□□□ -2.48
Upf3bQ3ULL6 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.47□□□□□ -2.48
Upf3bQ3ULL6 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.47□□□□□ -2.48
Upf3bQ3ULL6 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.47□□□□□ -2.48
Upf3bQ3ULL6 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.47□□□□□ -2.48
Upf3bQ3ULL6 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.48□□□□□ -2.49
Upf3bQ3ULL6 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.48□□□□□ -2.49
Upf3bQ3ULL6 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.48□□□□□ -2.49
Upf3bQ3ULL6 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.48□□□□□ -2.49
Upf3bQ3ULL6 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.48□□□□□ -2.49
Upf3bQ3ULL6 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.49□□□□□ -2.49
Upf3bQ3ULL6 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.5□□□□□ -2.49
Upf3bQ3ULL6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
Upf3bQ3ULL6 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.51□□□□□ -2.49
Upf3bQ3ULL6 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.51□□□□□ -2.49
Upf3bQ3ULL6 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.51□□□□□ -2.49
Upf3bQ3ULL6 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.51□□□□□ -2.49
Upf3bQ3ULL6 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.52□□□□□ -2.49
Upf3bQ3ULL6 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.53□□□□□ -2.49
Upf3bQ3ULL6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.53□□□□□ -2.49
Upf3bQ3ULL6 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.53□□□□□ -2.49
Upf3bQ3ULL6 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
Upf3bQ3ULL6 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Mir327-201ENSMUST00000199328 69 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.55□□□□□ -2.5
Upf3bQ3ULL6 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 Gm28211-201ENSMUST00000190920 315 ntBASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Upf3bQ3ULL6 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.57□□□□□ -2.5
Upf3bQ3ULL6 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.57□□□□□ -2.5
Upf3bQ3ULL6 Mir146-201ENSMUST00000083667 65 ntBASIC-0.57□□□□□ -2.5
Upf3bQ3ULL6 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.57□□□□□ -2.5
Upf3bQ3ULL6 Mir875-201ENSMUST00000104698 78 ntBASIC-0.58□□□□□ -2.5
Upf3bQ3ULL6 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.58□□□□□ -2.5
Upf3bQ3ULL6 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.58□□□□□ -2.5
Upf3bQ3ULL6 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC-0.58□□□□□ -2.5
Upf3bQ3ULL6 Mir489-201ENSMUST00000093599 107 ntBASIC-0.58□□□□□ -2.5
Upf3bQ3ULL6 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Mir186-201ENSMUST00000083497 71 ntBASIC-0.59□□□□□ -2.5
Upf3bQ3ULL6 Mir574-201ENSMUST00000103854 78 ntBASIC-0.6□□□□□ -2.51
Upf3bQ3ULL6 Gm22080-201ENSMUST00000157591 106 ntBASIC-0.6□□□□□ -2.51
Upf3bQ3ULL6 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.6□□□□□ -2.51
Upf3bQ3ULL6 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 161.3 ms