Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm23986-201ENSMUST00000157144 63 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Gm22082-201ENSMUST00000157587 161 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Gm22522-201ENSMUST00000158271 151 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Gm25769-201ENSMUST00000158569 127 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Gm25247-201ENSMUST00000175475 90 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Mir6402-201ENSMUST00000183406 80 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Mir6377-201ENSMUST00000183760 114 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Gm28383-201ENSMUST00000187563 139 ntBASIC2.56□□□□□ -2
Col17a1Q07563 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.56□□□□□ -2
Col17a1Q07563 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col17a1Q07563 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col17a1Q07563 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.55□□□□□ -2
Col17a1Q07563 Gm24649-201ENSMUST00000157106 134 ntBASIC2.55□□□□□ -2
Col17a1Q07563 Gm23113-201ENSMUST00000158477 99 ntBASIC2.55□□□□□ -2
Col17a1Q07563 Mir6928-201ENSMUST00000185166 70 ntBASIC2.55□□□□□ -2
Col17a1Q07563 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.55□□□□□ -2
Col17a1Q07563 Gm23203-201ENSMUST00000104374 107 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm25497-201ENSMUST00000104425 132 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm22605-201ENSMUST00000158289 108 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm25715-201ENSMUST00000158627 125 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm22095-201ENSMUST00000158984 150 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm23917-201ENSMUST00000175256 98 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm22458-201ENSMUST00000082576 107 ntBASIC2.54□□□□□ -2
Col17a1Q07563 Gm25526-201ENSMUST00000104332 132 ntBASIC2.53□□□□□ -2
Col17a1Q07563 Gm22678-201ENSMUST00000116974 101 ntBASIC2.53□□□□□ -2
Col17a1Q07563 Gm27987-201ENSMUST00000184023 93 ntBASIC2.53□□□□□ -2
Col17a1Q07563 Gm3702-201ENSMUST00000211754 346 ntBASIC2.53□□□□□ -2
Col17a1Q07563 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.53□□□□□ -2
Col17a1Q07563 Gm6985-201ENSMUST00000121255 271 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm22221-201ENSMUST00000157362 103 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm28669-201ENSMUST00000188400 100 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm45456-201ENSMUST00000210841 243 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col17a1Q07563 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm27582-201ENSMUST00000184084 126 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm45268-201ENSMUST00000210046 370 ntBASIC2.52□□□□□ -2.01
Col17a1Q07563 Gm22332-201ENSMUST00000158072 126 ntBASIC2.51□□□□□ -2.01
Col17a1Q07563 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.51□□□□□ -2.01
Col17a1Q07563 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.51□□□□□ -2.01
Col17a1Q07563 Gm24615-201ENSMUST00000083268 113 ntBASIC2.51□□□□□ -2.01
Col17a1Q07563 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col17a1Q07563 Mir374b-201ENSMUST00000102314 95 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Gm13885-201ENSMUST00000117569 187 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Gm23122-201ENSMUST00000157645 103 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Gm25558-201ENSMUST00000158083 106 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Gm24801-201ENSMUST00000178503 105 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Gm24390-201ENSMUST00000179578 62 ntBASIC2.5□□□□□ -2.01
Col17a1Q07563 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm24598-201ENSMUST00000122510 74 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Snora26-201ENSMUST00000175614 121 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm25229-201ENSMUST00000178587 79 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm25933-201ENSMUST00000178943 108 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm44459-201ENSMUST00000203926 160 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm20108-201ENSMUST00000219977 153 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm24918-201ENSMUST00000083022 130 ntBASIC2.49□□□□□ -2.01
Col17a1Q07563 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col17a1Q07563 Gm22270-201ENSMUST00000104034 132 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm22658-201ENSMUST00000104196 155 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm23126-201ENSMUST00000104260 134 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm23351-201ENSMUST00000158427 125 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm25711-201ENSMUST00000158633 128 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Traj61-201ENSMUST00000165025 72 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm24510-201ENSMUST00000174965 94 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm25644-201ENSMUST00000083209 107 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Mir155-201ENSMUST00000083463 65 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm25337-201ENSMUST00000083723 104 ntBASIC2.48□□□□□ -2.01
Col17a1Q07563 Gm14671-201ENSMUST00000121790 262 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm24250-201ENSMUST00000157320 135 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm23858-201ENSMUST00000158384 106 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm23770-201ENSMUST00000178009 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm22832-201ENSMUST00000178022 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm23863-201ENSMUST00000178265 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm24828-201ENSMUST00000178507 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm23052-201ENSMUST00000178633 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm25729-201ENSMUST00000179050 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm25359-201ENSMUST00000179315 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm22624-201ENSMUST00000179913 108 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm44024-201ENSMUST00000203008 476 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm23040-201ENSMUST00000083869 163 ntBASIC2.47□□□□□ -2.01
Col17a1Q07563 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Gm23785-201ENSMUST00000116741 96 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Mir1197-201ENSMUST00000117037 120 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Gm24495-201ENSMUST00000178575 79 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Gm22253-201ENSMUST00000179870 79 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Gm25696-201ENSMUST00000082900 105 ntBASIC2.46□□□□□ -2.02
Col17a1Q07563 Gm22387-201ENSMUST00000158191 131 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Gm20409-201ENSMUST00000173457 130 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Gm25740-201ENSMUST00000180247 107 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Gm27639-201ENSMUST00000184937 85 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Mir6376-201ENSMUST00000185149 131 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 AC160976.1-201ENSMUST00000215092 148 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Gm24805-201ENSMUST00000082931 104 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.45□□□□□ -2.02
Col17a1Q07563 Gm22677-201ENSMUST00000116977 108 ntBASIC2.44□□□□□ -2.02
Col17a1Q07563 Gm14884-201ENSMUST00000120456 196 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms