Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm25889-201ENSMUST00000157775 107 ntBASIC1.82□□□□□ -2.12
Sox9Q04887 Gm23083-201ENSMUST00000157851 116 ntBASIC1.82□□□□□ -2.12
Sox9Q04887 Gm26498-201ENSMUST00000177799 79 ntBASIC1.82□□□□□ -2.12
Sox9Q04887 Gm26230-201ENSMUST00000180141 79 ntBASIC1.82□□□□□ -2.12
Sox9Q04887 Mir7059-201ENSMUST00000184825 59 ntBASIC1.82□□□□□ -2.12
Sox9Q04887 Gm22196-201ENSMUST00000116865 109 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Gm24913-201ENSMUST00000157286 107 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Gm25011-201ENSMUST00000158398 126 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Snora24-201ENSMUST00000174989 130 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Mir7052-201ENSMUST00000184821 65 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Gm23140-201ENSMUST00000082487 107 ntBASIC1.81□□□□□ -2.12
Sox9Q04887 Gm23654-201ENSMUST00000116758 126 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 Gm22200-201ENSMUST00000158614 67 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 Gm25678-201ENSMUST00000174984 73 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 Gm22070-201ENSMUST00000178475 107 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 Gm42795-201ENSMUST00000198847 76 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.8□□□□□ -2.12
Sox9Q04887 Gm25610-201ENSMUST00000104016 129 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm15115-201ENSMUST00000121145 264 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm24262-201ENSMUST00000157431 144 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm23644-201ENSMUST00000157856 77 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm22425-201ENSMUST00000158532 138 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm23197-201ENSMUST00000158809 112 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm24572-201ENSMUST00000175505 88 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm23419-201ENSMUST00000175523 84 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Gm25936-201ENSMUST00000179952 114 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.79□□□□□ -2.12
Sox9Q04887 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Sox9Q04887 Gm12086-201ENSMUST00000120863 228 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Gm24783-201ENSMUST00000157639 100 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Gm26038-201ENSMUST00000158151 106 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Gm24154-201ENSMUST00000175261 130 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Mir6985-201ENSMUST00000184641 61 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Mir344-201ENSMUST00000083634 95 ntBASIC1.78□□□□□ -2.12
Sox9Q04887 Mir544-201ENSMUST00000103813 78 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Mir873a-201ENSMUST00000104863 77 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Gm22490-201ENSMUST00000157188 119 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Mir7675-201ENSMUST00000184262 58 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Gm27656-201ENSMUST00000185055 80 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Gm44807-201ENSMUST00000206115 154 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Snora41-201ENSMUST00000082668 132 ntBASIC1.77□□□□□ -2.13
Sox9Q04887 Gm26081-201ENSMUST00000104068 132 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Gm25541-201ENSMUST00000116888 126 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Gm23329-201ENSMUST00000157415 108 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Gm25978-201ENSMUST00000158698 90 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Gm24624-201ENSMUST00000082617 164 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Gm23299-201ENSMUST00000082708 79 ntBASIC1.76□□□□□ -2.13
Sox9Q04887 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Sox9Q04887 Snord71-201ENSMUST00000104361 85 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Gm27544-201ENSMUST00000185069 155 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Gm28256-201ENSMUST00000188953 139 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Gm28559-201ENSMUST00000190532 139 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Gm42506-201ENSMUST00000202009 150 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Mir320-201ENSMUST00000083594 82 ntBASIC1.75□□□□□ -2.13
Sox9Q04887 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.74□□□□□ -2.13
Sox9Q04887 Mir653-201ENSMUST00000102402 85 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm23336-201ENSMUST00000117023 123 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm22213-201ENSMUST00000157564 119 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm25380-201ENSMUST00000175463 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm24641-201ENSMUST00000178055 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm25484-201ENSMUST00000178217 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm26138-201ENSMUST00000179236 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm22821-201ENSMUST00000179288 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm45429-201ENSMUST00000209527 172 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm23298-201ENSMUST00000083181 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm24614-201ENSMUST00000083269 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm22057-201ENSMUST00000083387 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Gm25516-201ENSMUST00000083857 107 ntBASIC1.74□□□□□ -2.13
Sox9Q04887 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Sox9Q04887 Gm23340-201ENSMUST00000158955 123 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Mir6950-201ENSMUST00000184438 73 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Gm44462-201ENSMUST00000199696 129 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Snord1a-201ENSMUST00000083160 74 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Snora2b-201ENSMUST00000084005 137 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.73□□□□□ -2.13
Sox9Q04887 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Sox9Q04887 Mir343-201ENSMUST00000102360 75 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm16550-201ENSMUST00000162550 126 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Traj61-201ENSMUST00000165025 72 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm25958-201ENSMUST00000175114 71 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm22929-201ENSMUST00000175517 107 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Mir1954-201ENSMUST00000175595 86 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm22638-201ENSMUST00000179674 107 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm43324-201ENSMUST00000197482 289 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Sox9Q04887 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.72□□□□□ -2.13
Sox9Q04887 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Gm22004-201ENSMUST00000101884 107 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Mir3098-201ENSMUST00000175416 87 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Gm22802-201ENSMUST00000175621 89 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Gm28270-201ENSMUST00000188550 109 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Gm28328-201ENSMUST00000188869 109 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Sox9Q04887 Gm23507-201ENSMUST00000083078 107 ntBASIC1.71□□□□□ -2.14
Sox9Q04887 Gm22031-201ENSMUST00000116945 126 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms