Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 Mir802-201ENSMUST00000103258 97 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 Gm16510-201ENSMUST00000153501 249 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 Gm23996-201ENSMUST00000158062 131 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 Mir5619-201ENSMUST00000176065 61 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.3□□□□□ -2.04
Col6a1Q04857 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col6a1Q04857 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a1Q04857 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.29□□□□□ -2.04
Col6a1Q04857 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a1Q04857 Gm25994-201ENSMUST00000175392 101 ntBASIC2.29□□□□□ -2.04
Col6a1Q04857 Trbv25-201ENSMUST00000194700 273 ntBASIC2.29□□□□□ -2.04
Col6a1Q04857 Snora3-201ENSMUST00000083082 132 ntBASIC2.29□□□□□ -2.04
Col6a1Q04857 Gm24412-201ENSMUST00000083426 109 ntBASIC2.29□□□□□ -2.04
Col6a1Q04857 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a1Q04857 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
Col6a1Q04857 Gm23261-201ENSMUST00000158316 136 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Gm26213-201ENSMUST00000158582 110 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Gm25750-201ENSMUST00000175483 112 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Gm25449-201ENSMUST00000179389 79 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Gm44462-201ENSMUST00000199696 129 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Gm42935-201ENSMUST00000202004 151 ntBASIC2.28□□□□□ -2.04
Col6a1Q04857 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a1Q04857 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25832-201ENSMUST00000104140 130 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Mir1949-201ENSMUST00000157434 141 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25370-201ENSMUST00000158159 94 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25011-201ENSMUST00000158398 126 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25658-201ENSMUST00000158472 128 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm22503-201ENSMUST00000158983 115 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm23375-201ENSMUST00000175407 83 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25402-201ENSMUST00000082966 131 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Gm25337-201ENSMUST00000083723 104 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Snord80-201ENSMUST00000083801 81 ntBASIC2.27□□□□□ -2.05
Col6a1Q04857 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col6a1Q04857 Gm25329-201ENSMUST00000158041 126 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Gm23838-201ENSMUST00000158067 162 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Gm22425-201ENSMUST00000158532 138 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Gm24880-201ENSMUST00000158776 85 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Gm22093-201ENSMUST00000158980 111 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Mir6379-201ENSMUST00000183392 115 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Mir107-201ENSMUST00000083660 87 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Snora69-201ENSMUST00000083708 131 ntBASIC2.26□□□□□ -2.05
Col6a1Q04857 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.25□□□□□ -2.05
Col6a1Q04857 Gm24900-201ENSMUST00000158128 134 ntBASIC2.25□□□□□ -2.05
Col6a1Q04857 Mir6352-201ENSMUST00000184495 116 ntBASIC2.25□□□□□ -2.05
Col6a1Q04857 Gm22884-201ENSMUST00000083127 140 ntBASIC2.25□□□□□ -2.05
Col6a1Q04857 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Col6a1Q04857 Gm24801-201ENSMUST00000178503 105 ntBASIC2.24□□□□□ -2.05
Col6a1Q04857 Gm24523-201ENSMUST00000083965 132 ntBASIC2.24□□□□□ -2.05
Col6a1Q04857 Mir7679-201ENSMUST00000183379 63 ntBASIC2.23□□□□□ -2.05
Col6a1Q04857 Gm24527-201ENSMUST00000082920 107 ntBASIC2.23□□□□□ -2.05
Col6a1Q04857 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col6a1Q04857 Gm26425-201ENSMUST00000122529 82 ntBASIC2.22□□□□□ -2.05
Col6a1Q04857 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.22□□□□□ -2.05
Col6a1Q04857 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.22□□□□□ -2.05
Col6a1Q04857 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col6a1Q04857 Gm22672-201ENSMUST00000104414 134 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm22089-201ENSMUST00000158336 102 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm20391-201ENSMUST00000174722 106 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm25949-201ENSMUST00000175333 114 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm27979-201ENSMUST00000185126 56 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.21□□□□□ -2.06
Col6a1Q04857 Gm15654-201ENSMUST00000152660 300 ntBASIC2.2□□□□□ -2.06
Col6a1Q04857 Gm25044-201ENSMUST00000158603 104 ntBASIC2.2□□□□□ -2.06
Col6a1Q04857 Gm21885-201ENSMUST00000178891 327 ntBASIC2.2□□□□□ -2.06
Col6a1Q04857 Mir7217-201ENSMUST00000200304 62 ntBASIC2.2□□□□□ -2.06
Col6a1Q04857 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a1Q04857 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a1Q04857 Gm15692-201ENSMUST00000152173 352 ntBASIC2.19□□□□□ -2.06
Col6a1Q04857 Gm23267-201ENSMUST00000178490 132 ntBASIC2.19□□□□□ -2.06
Col6a1Q04857 Gm26398-201ENSMUST00000179015 127 ntBASIC2.19□□□□□ -2.06
Col6a1Q04857 Gm5900-201ENSMUST00000179862 375 ntBASIC2.19□□□□□ -2.06
Col6a1Q04857 Gm24203-201ENSMUST00000082949 114 ntBASIC2.19□□□□□ -2.06
Col6a1Q04857 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a1Q04857 Gm25382-201ENSMUST00000157811 97 ntBASIC2.18□□□□□ -2.06
Col6a1Q04857 Gm26369-201ENSMUST00000157825 100 ntBASIC2.18□□□□□ -2.06
Col6a1Q04857 Gm23967-201ENSMUST00000175062 78 ntBASIC2.18□□□□□ -2.06
Col6a1Q04857 Gm16539-201ENSMUST00000160086 327 ntBASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm44490-201ENSMUST00000198566 127 ntBASIC2.17□□□□□ -2.06
Col6a1Q04857 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.17□□□□□ -2.06
Col6a1Q04857 Gm24805-201ENSMUST00000082931 104 ntBASIC2.17□□□□□ -2.06
Col6a1Q04857 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a1Q04857 Mir20b-201ENSMUST00000102087 80 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm22540-201ENSMUST00000158168 117 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm23065-201ENSMUST00000158236 130 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm24946-201ENSMUST00000158332 106 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Gm25838-201ENSMUST00000158920 120 ntBASIC2.16□□□□□ -2.06
Col6a1Q04857 Snord87-201ENSMUST00000175437 87 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 245.6 ms