Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.35□□□□□ -2.35
Scn1bP97952 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.35□□□□□ -2.35
Scn1bP97952 Gm25482-201ENSMUST00000083225 107 ntBASIC0.35□□□□□ -2.35
Scn1bP97952 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.34□□□□□ -2.35
Scn1bP97952 Gm25496-201ENSMUST00000104430 120 ntBASIC0.34□□□□□ -2.36
Scn1bP97952 Gm27934-201ENSMUST00000158795 63 ntBASIC0.34□□□□□ -2.36
Scn1bP97952 Gm28724-201ENSMUST00000186149 625 ntBASIC0.34□□□□□ -2.36
Scn1bP97952 Gm24258-201ENSMUST00000083739 133 ntBASIC0.34□□□□□ -2.36
Scn1bP97952 Gm24342-201ENSMUST00000103907 104 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Gm23321-201ENSMUST00000104465 126 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Gm23881-201ENSMUST00000116872 66 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Gm26285-201ENSMUST00000177923 107 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Gm5002-201ENSMUST00000207145 223 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Gm23622-201ENSMUST00000082460 107 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Mir10b-201ENSMUST00000083566 68 ntBASIC0.33□□□□□ -2.36
Scn1bP97952 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Scn1bP97952 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Gm22520-201ENSMUST00000158269 129 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Gm10548-202ENSMUST00000165672 272 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Gm23917-201ENSMUST00000175256 98 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Mir7657-201ENSMUST00000196051 57 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Mir3969-201ENSMUST00000197106 92 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Gm44457-201ENSMUST00000198109 76 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.32□□□□□ -2.36
Scn1bP97952 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Mir377-201ENSMUST00000083504 68 ntBASIC0.32□□□□□ -2.36
Scn1bP97952 Gm23672-201ENSMUST00000157471 107 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Gm26158-201ENSMUST00000158973 119 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Gm22239-201ENSMUST00000175220 103 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Gm24761-201ENSMUST00000179589 127 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Gm27475-201ENSMUST00000183420 61 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Mir7065-201ENSMUST00000185110 61 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Mir200a-201ENSMUST00000083466 90 ntBASIC0.31□□□□□ -2.36
Scn1bP97952 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Gm13577-201ENSMUST00000121365 205 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Gm27446-201ENSMUST00000183963 89 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Mir7229-201ENSMUST00000197062 53 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Gm45002-201ENSMUST00000208045 120 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Mir488-201ENSMUST00000093595 109 ntBASIC0.3□□□□□ -2.36
Scn1bP97952 Gm14626-201ENSMUST00000117619 216 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm23859-201ENSMUST00000158383 64 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm20409-201ENSMUST00000173457 130 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm27465-201ENSMUST00000184290 91 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm44469-201ENSMUST00000198558 79 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Scn1bP97952 Gm24640-201ENSMUST00000116949 126 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm22626-201ENSMUST00000116990 126 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm23857-201ENSMUST00000158379 111 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm43381-201ENSMUST00000198553 165 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm44455-201ENSMUST00000200061 82 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm3702-201ENSMUST00000211754 346 ntBASIC0.28□□□□□ -2.36
Scn1bP97952 Gm23060-201ENSMUST00000102345 109 ntBASIC0.27□□□□□ -2.37
Scn1bP97952 Gm14502-201ENSMUST00000118154 113 ntBASIC0.27□□□□□ -2.37
Scn1bP97952 Mir6342-201ENSMUST00000183870 125 ntBASIC0.27□□□□□ -2.37
Scn1bP97952 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Scn1bP97952 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.27□□□□□ -2.37
Scn1bP97952 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Scn1bP97952 Mir20b-201ENSMUST00000102087 80 ntBASIC0.26□□□□□ -2.37
Scn1bP97952 Gm24772-201ENSMUST00000158507 110 ntBASIC0.26□□□□□ -2.37
Scn1bP97952 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.26□□□□□ -2.37
Scn1bP97952 Gm23126-201ENSMUST00000104260 134 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.25□□□□□ -2.37
Scn1bP97952 Gm12469-201ENSMUST00000117623 207 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Scn1bP97952 Gm23008-201ENSMUST00000158946 80 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Gm24321-201ENSMUST00000175348 80 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Mir7079-201ENSMUST00000184697 69 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Gm27943-201ENSMUST00000184844 116 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Gm25894-201ENSMUST00000083458 75 ntBASIC0.25□□□□□ -2.37
Scn1bP97952 Gm25693-201ENSMUST00000175443 85 ntBASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm18665-201ENSMUST00000189783 270 ntBASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn1bP97952 Snord80-202ENSMUST00000199023 77 ntBASIC0.24□□□□□ -2.37
Scn1bP97952 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.24□□□□□ -2.37
Scn1bP97952 Gm26204-201ENSMUST00000082906 107 ntBASIC0.24□□□□□ -2.37
Scn1bP97952 Gm25416-201ENSMUST00000104221 107 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm24232-201ENSMUST00000104314 132 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm24833-201ENSMUST00000116775 120 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Mir1191-201ENSMUST00000116883 120 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Scarna8-201ENSMUST00000158333 131 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm26426-201ENSMUST00000177866 123 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm26060-201ENSMUST00000180094 123 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm42623-201ENSMUST00000197225 379 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm44828-201ENSMUST00000203745 106 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.23□□□□□ -2.37
Scn1bP97952 Gm25329-201ENSMUST00000158041 126 ntBASIC0.22□□□□□ -2.37
Scn1bP97952 Gm22541-201ENSMUST00000158165 127 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms