Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.46□□□□□ -2.34
Sox3P53784 Gm25315-201ENSMUST00000116823 121 ntBASIC0.45□□□□□ -2.34
Sox3P53784 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.45□□□□□ -2.34
Sox3P53784 Gm22612-201ENSMUST00000158293 101 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Gm25364-201ENSMUST00000158851 107 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Gm27289-201ENSMUST00000183341 82 ntBASIC0.45□□□□□ -2.34
Sox3P53784 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Gm24527-201ENSMUST00000082920 107 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Gm22576-201ENSMUST00000083733 104 ntBASIC0.45□□□□□ -2.34
Sox3P53784 Gm23749-201ENSMUST00000104223 131 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm24250-201ENSMUST00000157320 135 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm24728-201ENSMUST00000158226 125 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm22476-201ENSMUST00000158902 100 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm23770-201ENSMUST00000178009 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm22832-201ENSMUST00000178022 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm23863-201ENSMUST00000178265 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm24828-201ENSMUST00000178507 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm23052-201ENSMUST00000178633 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm25729-201ENSMUST00000179050 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm25359-201ENSMUST00000179315 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm22624-201ENSMUST00000179913 108 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm44353-201ENSMUST00000200618 138 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Gm45002-201ENSMUST00000208045 120 ntBASIC0.44□□□□□ -2.34
Sox3P53784 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.44□□□□□ -2.34
Sox3P53784 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Mir411-201ENSMUST00000083543 82 ntBASIC0.44□□□□□ -2.34
Sox3P53784 Snord69-201ENSMUST00000104024 80 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm24590-201ENSMUST00000116699 119 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm14946-201ENSMUST00000119859 296 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm14884-201ENSMUST00000120456 196 ntBASIC0.43□□□□□ -2.34
Sox3P53784 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm25653-201ENSMUST00000158473 138 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm26426-201ENSMUST00000177866 123 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm26060-201ENSMUST00000180094 123 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm37116-201ENSMUST00000195161 147 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm26204-201ENSMUST00000082906 107 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Mir201-201ENSMUST00000083470 66 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.43□□□□□ -2.34
Sox3P53784 Gm23080-201ENSMUST00000157846 103 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Gm23838-201ENSMUST00000158067 162 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Gm22259-201ENSMUST00000178926 107 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Gm27285-201ENSMUST00000183875 127 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Gm25814-201ENSMUST00000082754 107 ntBASIC0.42□□□□□ -2.34
Sox3P53784 Gm23772-201ENSMUST00000104433 102 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Gm25985-201ENSMUST00000122677 107 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Gm16550-201ENSMUST00000162550 126 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Mir6390-201ENSMUST00000184405 129 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Mir6928-201ENSMUST00000185166 70 ntBASIC0.41□□□□□ -2.34
Sox3P53784 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Sox3P53784 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Mir302d-201ENSMUST00000083513 66 ntBASIC0.41□□□□□ -2.34
Sox3P53784 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Sox3P53784 Gm22332-201ENSMUST00000158072 126 ntBASIC0.4□□□□□ -2.35
Sox3P53784 Gm24415-201ENSMUST00000180218 107 ntBASIC0.4□□□□□ -2.35
Sox3P53784 Gm27465-201ENSMUST00000184290 91 ntBASIC0.4□□□□□ -2.35
Sox3P53784 Gm37586-201ENSMUST00000193654 204 ntBASIC0.4□□□□□ -2.35
Sox3P53784 Gm42795-201ENSMUST00000198847 76 ntBASIC0.4□□□□□ -2.35
Sox3P53784 Gm22079-201ENSMUST00000157592 106 ntBASIC0.39□□□□□ -2.35
Sox3P53784 Gm22946-201ENSMUST00000158558 82 ntBASIC0.39□□□□□ -2.35
Sox3P53784 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.39□□□□□ -2.35
Sox3P53784 Mir710-201ENSMUST00000102088 110 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Sox3P53784 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm22989-201ENSMUST00000158313 86 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm27934-201ENSMUST00000158795 63 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Mir6369-201ENSMUST00000183772 106 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm28767-201ENSMUST00000188601 114 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm24030-201ENSMUST00000083931 164 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Mir488-201ENSMUST00000093595 109 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Mir471-201ENSMUST00000093596 67 ntBASIC0.38□□□□□ -2.35
Sox3P53784 Gm15289-201ENSMUST00000117793 244 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm24238-201ENSMUST00000157792 98 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm24500-201ENSMUST00000158447 124 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm26468-201ENSMUST00000158644 106 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm25444-201ENSMUST00000158999 113 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm43381-201ENSMUST00000198553 165 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Sox3P53784 Gm23461-201ENSMUST00000083265 107 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm22753-201ENSMUST00000083657 107 ntBASIC0.37□□□□□ -2.35
Sox3P53784 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
Sox3P53784 Gm22148-201ENSMUST00000104445 107 ntBASIC0.36□□□□□ -2.35
Sox3P53784 Gm25300-201ENSMUST00000175284 84 ntBASIC0.36□□□□□ -2.35
Sox3P53784 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Sox3P53784 Snord80-202ENSMUST00000199023 77 ntBASIC0.36□□□□□ -2.35
Sox3P53784 Gm44807-201ENSMUST00000206115 154 ntBASIC0.36□□□□□ -2.35
Sox3P53784 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Sox3P53784 Gm23989-201ENSMUST00000117030 66 ntBASIC0.35□□□□□ -2.35
Sox3P53784 Gm23036-201ENSMUST00000157885 99 ntBASIC0.35□□□□□ -2.35
Sox3P53784 Gm23859-201ENSMUST00000158383 64 ntBASIC0.35□□□□□ -2.35
Sox3P53784 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.35□□□□□ -2.35
Sox3P53784 Gm14502-201ENSMUST00000118154 113 ntBASIC0.34□□□□□ -2.36
Sox3P53784 Gm25108-201ENSMUST00000122473 78 ntBASIC0.34□□□□□ -2.36
Sox3P53784 Gm23852-201ENSMUST00000158376 77 ntBASIC0.34□□□□□ -2.36
Sox3P53784 Gm20409-201ENSMUST00000173457 130 ntBASIC0.34□□□□□ -2.36
Sox3P53784 Gm27694-201ENSMUST00000184740 86 ntBASIC0.34□□□□□ -2.36
Sox3P53784 Gm44922-201ENSMUST00000206690 90 ntBASIC0.34□□□□□ -2.36
Sox3P53784 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms