Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm23208-201ENSMUST00000158666 127 ntBASIC2,22□□□□□ -2,05
Sox1P53783 Gm25994-201ENSMUST00000175392 101 ntBASIC2,22□□□□□ -2,05
Sox1P53783 Gm43626-201ENSMUST00000198575 162 ntBASIC2,22□□□□□ -2,05
Sox1P53783 AC132384.11-201ENSMUST00000219676 178 ntBASIC2,22□□□□□ -2,05
Sox1P53783 AC132833.2-201ENSMUST00000228699 157 ntBASIC2,22□□□□□ -2,05
Sox1P53783 Mir448-201ENSMUST00000083516 112 ntBASIC2,22□□□□□ -2,05
Sox1P53783 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2,22□□□□□ -2,05
Sox1P53783 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2,21□□□□□ -2,06
Sox1P53783 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2,21□□□□□ -2,06
Sox1P53783 Gm16539-201ENSMUST00000160086 327 ntBASIC2,21□□□□□ -2,06
Sox1P53783 Mir7683-201ENSMUST00000183842 61 ntBASIC2,21□□□□□ -2,06
Sox1P53783 Gm28794-201ENSMUST00000185276 136 ntBASIC2,21□□□□□ -2,06
Sox1P53783 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2,21□□□□□ -2,06
Sox1P53783 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2,21□□□□□ -2,06
Sox1P53783 Gm25112-201ENSMUST00000122680 104 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Gm23261-201ENSMUST00000158316 136 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Gm23369-201ENSMUST00000175406 105 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Mir5619-201ENSMUST00000176065 61 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Gm27894-201ENSMUST00000184177 92 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Mir6901-201ENSMUST00000185062 62 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Gm43911-201ENSMUST00000203097 76 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Gm22866-201ENSMUST00000083947 177 ntBASIC2,2□□□□□ -2,06
Sox1P53783 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2,19□□□□□ -2,06
Sox1P53783 Mir654-201ENSMUST00000104787 84 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2,19□□□□□ -2,06
Sox1P53783 Gm15654-201ENSMUST00000152660 300 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm22503-201ENSMUST00000158983 115 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Snord87-201ENSMUST00000175437 87 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm25449-201ENSMUST00000179389 79 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Trbv25-201ENSMUST00000194700 273 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm8031-201ENSMUST00000213430 626 ntBASIC2,19□□□□□ -2,06
Sox1P53783 AC159093.2-201ENSMUST00000227881 297 ntBASIC2,19□□□□□ -2,06
Sox1P53783 n-R5s96-201ENSMUST00000082574 124 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm25402-201ENSMUST00000082966 131 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Mir221-201ENSMUST00000083488 95 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Gm25337-201ENSMUST00000083723 104 ntBASIC2,19□□□□□ -2,06
Sox1P53783 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2,19□□□□□ -2,06
Sox1P53783 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2,18□□□□□ -2,06
Sox1P53783 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2,18□□□□□ -2,06
Sox1P53783 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2,18□□□□□ -2,06
Sox1P53783 Gm24342-201ENSMUST00000103907 104 ntBASIC2,18□□□□□ -2,06
Sox1P53783 Gm24801-201ENSMUST00000178503 105 ntBASIC2,18□□□□□ -2,06
Sox1P53783 Gm24412-201ENSMUST00000083426 109 ntBASIC2,18□□□□□ -2,06
Sox1P53783 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2,18□□□□□ -2,06
Sox1P53783 Gm24098-201ENSMUST00000102075 109 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm25381-201ENSMUST00000102078 109 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm22672-201ENSMUST00000104414 134 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm24237-201ENSMUST00000157790 132 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm25838-201ENSMUST00000158920 120 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm5900-201ENSMUST00000179862 375 ntBASIC2,17□□□□□ -2,06
Sox1P53783 AC141438.3-201ENSMUST00000215632 202 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Mir107-201ENSMUST00000083660 87 ntBASIC2,17□□□□□ -2,06
Sox1P53783 Gm23065-201ENSMUST00000158236 130 ntBASIC2,16□□□□□ -2,06
Sox1P53783 Snora24-201ENSMUST00000174989 130 ntBASIC2,16□□□□□ -2,06
Sox1P53783 Gm45265-201ENSMUST00000210852 2497 ntBASIC2,16□□□□□ -2,06
Sox1P53783 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2,16□□□□□ -2,06
Sox1P53783 Gm26425-201ENSMUST00000122529 82 ntBASIC2,15□□□□□ -2,07
Sox1P53783 Gm24475-201ENSMUST00000157435 143 ntBASIC2,15□□□□□ -2,07
Sox1P53783 Gm24288-201ENSMUST00000157630 144 ntBASIC2,15□□□□□ -2,07
Sox1P53783 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2,15□□□□□ -2,07
Sox1P53783 Mir7665-201ENSMUST00000184907 63 ntBASIC2,15□□□□□ -2,07
Sox1P53783 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2,14□□□□□ -2,07
Sox1P53783 Mir20b-201ENSMUST00000102087 80 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Gm26369-201ENSMUST00000157825 100 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Gm24769-201ENSMUST00000158506 129 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Mir3057-201ENSMUST00000175040 91 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Snord104-201ENSMUST00000083192 70 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2,14□□□□□ -2,07
Sox1P53783 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2,13□□□□□ -2,07
Sox1P53783 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2,13□□□□□ -2,07
Sox1P53783 Gm42664-201ENSMUST00000199417 3239 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Gm22486-201ENSMUST00000116815 137 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Gm23033-201ENSMUST00000157996 134 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Gm22200-201ENSMUST00000158614 67 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Mir6394-201ENSMUST00000184738 99 ntBASIC2,13□□□□□ -2,07
Sox1P53783 mt-Tc-201ENSMUST00000082400 66 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Gm25038-201ENSMUST00000082928 130 ntBASIC2,13□□□□□ -2,07
Sox1P53783 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2,13□□□□□ -2,07
Sox1P53783 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm22983-201ENSMUST00000158308 104 ntBASIC2,12□□□□□ -2,07
Sox1P53783 Gm26398-201ENSMUST00000179015 127 ntBASIC2,12□□□□□ -2,07
Sox1P53783 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm20118-201ENSMUST00000187207 162 ntBASIC2,12□□□□□ -2,07
Sox1P53783 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Mir30f-201ENSMUST00000196073 92 ntBASIC2,12□□□□□ -2,07
Sox1P53783 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2,12□□□□□ -2,07
Sox1P53783 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2,12□□□□□ -2,07
Sox1P53783 Gm14405-201ENSMUST00000117808 2330 ntBASIC2,12□□□□□ -2,07
Sox1P53783 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2,11□□□□□ -2,07
Sox1P53783 Mir764-201ENSMUST00000103259 108 ntBASIC2,11□□□□□ -2,07
Sox1P53783 Gm25368-201ENSMUST00000158847 131 ntBASIC2,11□□□□□ -2,07
Sox1P53783 Gm28256-201ENSMUST00000188953 139 ntBASIC2,11□□□□□ -2,07
Retrieved 100 of 76,532 protein–RNA pairs in 93,6 ms