Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.76□□□□□ -2.13
Shmt1P50431 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Shmt1P50431 Gm26080-201ENSMUST00000104069 131 ntBASIC1.75□□□□□ -2.13
Shmt1P50431 Gm25044-201ENSMUST00000158603 104 ntBASIC1.75□□□□□ -2.13
Shmt1P50431 Gm16539-201ENSMUST00000160086 327 ntBASIC1.75□□□□□ -2.13
Shmt1P50431 Gm44462-201ENSMUST00000199696 129 ntBASIC1.75□□□□□ -2.13
Shmt1P50431 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Shmt1P50431 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Shmt1P50431 Mir654-201ENSMUST00000104787 84 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 Mir3096-201ENSMUST00000116685 71 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 Gm26253-201ENSMUST00000122493 103 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 U6.1-201ENSMUST00000157443 101 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 Gm25011-201ENSMUST00000158398 126 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.74□□□□□ -2.13
Shmt1P50431 Gm22251-201ENSMUST00000083216 107 ntBASIC1.74□□□□□ -2.13
Shmt1P50431 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Shmt1P50431 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.73□□□□□ -2.13
Shmt1P50431 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Shmt1P50431 Gm27722-201ENSMUST00000183908 76 ntBASIC1.73□□□□□ -2.13
Shmt1P50431 Gm28383-201ENSMUST00000187563 139 ntBASIC1.73□□□□□ -2.13
Shmt1P50431 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.73□□□□□ -2.13
Shmt1P50431 Gm22950-201ENSMUST00000082776 107 ntBASIC1.73□□□□□ -2.13
Shmt1P50431 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
Shmt1P50431 Gm23986-201ENSMUST00000157144 63 ntBASIC1.72□□□□□ -2.13
Shmt1P50431 Gm25329-201ENSMUST00000158041 126 ntBASIC1.72□□□□□ -2.13
Shmt1P50431 Mir3083-201ENSMUST00000175377 64 ntBASIC1.72□□□□□ -2.13
Shmt1P50431 Gm24099-201ENSMUST00000083384 107 ntBASIC1.72□□□□□ -2.13
Shmt1P50431 Gm23038-201ENSMUST00000083873 104 ntBASIC1.72□□□□□ -2.13
Shmt1P50431 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Shmt1P50431 Gm23601-201ENSMUST00000157259 131 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Mir5104-201ENSMUST00000175319 94 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Mir21c-201ENSMUST00000184910 78 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Gm42935-201ENSMUST00000202004 151 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Gm24524-201ENSMUST00000082925 170 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Shmt1P50431 Gm23172-201ENSMUST00000157160 124 ntBASIC1.7□□□□□ -2.14
Shmt1P50431 Gm25730-201ENSMUST00000178753 165 ntBASIC1.7□□□□□ -2.14
Shmt1P50431 Gm45754-201ENSMUST00000212380 279 ntBASIC1.7□□□□□ -2.14
Shmt1P50431 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.7□□□□□ -2.14
Shmt1P50431 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Shmt1P50431 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Shmt1P50431 Gm11248-201ENSMUST00000119568 201 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm22963-201ENSMUST00000157960 91 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm23351-201ENSMUST00000158427 125 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm25838-201ENSMUST00000158920 120 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm25831-201ENSMUST00000158924 163 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm24174-201ENSMUST00000158933 111 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm16550-201ENSMUST00000162550 126 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm23714-201ENSMUST00000179259 105 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm27517-201ENSMUST00000184347 236 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm44308-201ENSMUST00000197080 99 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Gm43977-201ENSMUST00000203970 189 ntBASIC1.69□□□□□ -2.14
Shmt1P50431 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Shmt1P50431 Gm23652-201ENSMUST00000116752 107 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm14882-201ENSMUST00000117216 218 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm15115-201ENSMUST00000121145 264 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm25289-201ENSMUST00000122799 119 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm26104-201ENSMUST00000157250 108 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm24902-201ENSMUST00000158126 123 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm22386-201ENSMUST00000158192 129 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm22200-201ENSMUST00000158614 67 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm22403-201ENSMUST00000174919 84 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Snora24-201ENSMUST00000174989 130 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm23267-201ENSMUST00000178490 132 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm28256-201ENSMUST00000188953 139 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm28559-201ENSMUST00000190532 139 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.68□□□□□ -2.14
Shmt1P50431 Gm15654-201ENSMUST00000152660 300 ntBASIC1.67□□□□□ -2.14
Shmt1P50431 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.67□□□□□ -2.14
Shmt1P50431 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Shmt1P50431 Gm25370-201ENSMUST00000158159 94 ntBASIC1.66□□□□□ -2.14
Shmt1P50431 Gm23967-201ENSMUST00000175062 78 ntBASIC1.66□□□□□ -2.14
Shmt1P50431 Mir3061-201ENSMUST00000175129 91 ntBASIC1.66□□□□□ -2.14
Shmt1P50431 Mir873a-201ENSMUST00000104863 77 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm23838-201ENSMUST00000158067 162 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm23817-201ENSMUST00000158449 104 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm25976-201ENSMUST00000158695 130 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm27248-201ENSMUST00000184004 166 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm28794-201ENSMUST00000185276 136 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm23299-201ENSMUST00000082708 79 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Gm23100-201ENSMUST00000083455 141 ntBASIC1.65□□□□□ -2.15
Shmt1P50431 Mir802-201ENSMUST00000103258 97 ntBASIC1.64□□□□□ -2.15
Shmt1P50431 Gm22089-201ENSMUST00000158336 102 ntBASIC1.64□□□□□ -2.15
Shmt1P50431 Mir6369-201ENSMUST00000183772 106 ntBASIC1.64□□□□□ -2.15
Shmt1P50431 Gm24805-201ENSMUST00000082931 104 ntBASIC1.64□□□□□ -2.15
Shmt1P50431 Gm22770-201ENSMUST00000158368 67 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 Gm29535-201ENSMUST00000185723 109 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 Gm28143-201ENSMUST00000191082 109 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 Gm23790-201ENSMUST00000083013 107 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 Snord80-201ENSMUST00000083801 81 ntBASIC1.63□□□□□ -2.15
Shmt1P50431 Gm24509-201ENSMUST00000157086 101 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms