Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Usp4P35123 Gm25610-201ENSMUST00000104016 129 ntBASIC1.8□□□□□ -2.12
Usp4P35123 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.8□□□□□ -2.12
Usp4P35123 Gm44308-201ENSMUST00000197080 99 ntBASIC1.8□□□□□ -2.12
Usp4P35123 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.8□□□□□ -2.12
Usp4P35123 Gm23100-201ENSMUST00000083455 141 ntBASIC1.8□□□□□ -2.12
Usp4P35123 Mir410-201ENSMUST00000083563 81 ntBASIC1.8□□□□□ -2.12
Usp4P35123 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Usp4P35123 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Usp4P35123 Mir873a-201ENSMUST00000104863 77 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm24649-201ENSMUST00000157106 134 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm22319-201ENSMUST00000157147 122 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm25887-201ENSMUST00000157777 84 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm24947-201ENSMUST00000158334 110 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm25978-201ENSMUST00000158698 90 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm24222-201ENSMUST00000158834 93 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm25241-201ENSMUST00000174909 84 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Gm26217-201ENSMUST00000175212 84 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Mir7679-201ENSMUST00000183379 63 ntBASIC1.79□□□□□ -2.12
Usp4P35123 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Usp4P35123 Mir544-201ENSMUST00000103813 78 ntBASIC1.78□□□□□ -2.12
Usp4P35123 Gm26253-201ENSMUST00000122493 103 ntBASIC1.78□□□□□ -2.12
Usp4P35123 Gm22603-201ENSMUST00000157603 96 ntBASIC1.78□□□□□ -2.12
Usp4P35123 Gm25423-201ENSMUST00000157609 107 ntBASIC1.78□□□□□ -2.12
Usp4P35123 Mir6351-201ENSMUST00000183826 99 ntBASIC1.78□□□□□ -2.12
Usp4P35123 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.78□□□□□ -2.12
Usp4P35123 Gm23838-201ENSMUST00000158067 162 ntBASIC1.77□□□□□ -2.13
Usp4P35123 Gm23351-201ENSMUST00000158427 125 ntBASIC1.77□□□□□ -2.13
Usp4P35123 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.77□□□□□ -2.13
Usp4P35123 Gm27248-201ENSMUST00000184004 166 ntBASIC1.77□□□□□ -2.13
Usp4P35123 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.77□□□□□ -2.13
Usp4P35123 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Usp4P35123 Gm22200-201ENSMUST00000158614 67 ntBASIC1.76□□□□□ -2.13
Usp4P35123 Snora24-201ENSMUST00000174989 130 ntBASIC1.76□□□□□ -2.13
Usp4P35123 Mir3061-201ENSMUST00000175129 91 ntBASIC1.76□□□□□ -2.13
Usp4P35123 Mir6369-201ENSMUST00000183772 106 ntBASIC1.76□□□□□ -2.13
Usp4P35123 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.76□□□□□ -2.13
Usp4P35123 Gm25838-201ENSMUST00000158920 120 ntBASIC1.75□□□□□ -2.13
Usp4P35123 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Usp4P35123 Mir21c-201ENSMUST00000184910 78 ntBASIC1.75□□□□□ -2.13
Usp4P35123 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.75□□□□□ -2.13
Usp4P35123 Gm42935-201ENSMUST00000202004 151 ntBASIC1.75□□□□□ -2.13
Usp4P35123 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Usp4P35123 Gm23170-201ENSMUST00000157158 106 ntBASIC1.74□□□□□ -2.13
Usp4P35123 Gm16307-201ENSMUST00000161269 210 ntBASIC1.74□□□□□ -2.13
Usp4P35123 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.74□□□□□ -2.13
Usp4P35123 Snord14a-201ENSMUST00000082807 87 ntBASIC1.74□□□□□ -2.13
Usp4P35123 Gm25038-201ENSMUST00000082928 130 ntBASIC1.74□□□□□ -2.13
Usp4P35123 Gm23244-201ENSMUST00000083375 92 ntBASIC1.74□□□□□ -2.13
Usp4P35123 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.73□□□□□ -2.13
Usp4P35123 Gm15654-201ENSMUST00000152660 300 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Gm23986-201ENSMUST00000157144 63 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Gm23106-201ENSMUST00000157554 101 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Gm22551-201ENSMUST00000157795 103 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Gm25035-201ENSMUST00000175414 77 ntBASIC1.73□□□□□ -2.13
Usp4P35123 Mir223-201ENSMUST00000102112 110 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm24509-201ENSMUST00000157086 101 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm25358-201ENSMUST00000157189 101 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm24174-201ENSMUST00000158933 111 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm16550-201ENSMUST00000162550 126 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm24575-201ENSMUST00000175502 77 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.72□□□□□ -2.13
Usp4P35123 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Usp4P35123 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Usp4P35123 Gm25370-201ENSMUST00000158159 94 ntBASIC1.71□□□□□ -2.14
Usp4P35123 Mir7675-201ENSMUST00000184262 58 ntBASIC1.71□□□□□ -2.14
Usp4P35123 Gm43977-201ENSMUST00000203970 189 ntBASIC1.71□□□□□ -2.14
Usp4P35123 Gm25650-201ENSMUST00000083784 162 ntBASIC1.71□□□□□ -2.14
Usp4P35123 Mir802-201ENSMUST00000103258 97 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Gm25832-201ENSMUST00000104140 130 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Gm11248-201ENSMUST00000119568 201 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Gm44384-201ENSMUST00000200208 114 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.7□□□□□ -2.14
Usp4P35123 Gm24524-201ENSMUST00000082925 170 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Mir532-201ENSMUST00000093630 96 ntBASIC1.7□□□□□ -2.14
Usp4P35123 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Usp4P35123 Gm22761-201ENSMUST00000102278 96 ntBASIC1.69□□□□□ -2.14
Usp4P35123 Gm25279-201ENSMUST00000122608 133 ntBASIC1.69□□□□□ -2.14
Usp4P35123 Gm23065-201ENSMUST00000158236 130 ntBASIC1.69□□□□□ -2.14
Usp4P35123 Gm22429-201ENSMUST00000158553 130 ntBASIC1.69□□□□□ -2.14
Usp4P35123 Gm24677-201ENSMUST00000158755 150 ntBASIC1.69□□□□□ -2.14
Usp4P35123 Mir7241-201ENSMUST00000184532 64 ntBASIC1.69□□□□□ -2.14
Usp4P35123 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.69□□□□□ -2.14
Usp4P35123 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.68□□□□□ -2.14
Usp4P35123 Gm25976-201ENSMUST00000158695 130 ntBASIC1.68□□□□□ -2.14
Usp4P35123 Gm22914-201ENSMUST00000175195 77 ntBASIC1.68□□□□□ -2.14
Usp4P35123 Mir30f-201ENSMUST00000196073 92 ntBASIC1.68□□□□□ -2.14
Usp4P35123 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
Usp4P35123 Mir148b-201ENSMUST00000083626 97 ntBASIC1.68□□□□□ -2.14
Usp4P35123 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Usp4P35123 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Mir764-201ENSMUST00000103259 108 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Scarna9-201ENSMUST00000104318 70 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Gm16265-201ENSMUST00000134558 108 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Gm23267-201ENSMUST00000178490 132 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.67□□□□□ -2.14
Usp4P35123 Gm14882-201ENSMUST00000117216 218 ntBASIC1.66□□□□□ -2.14
Usp4P35123 Gm23601-201ENSMUST00000157259 131 ntBASIC1.66□□□□□ -2.14
Usp4P35123 Gm22212-201ENSMUST00000158096 106 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms