Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Cdx1P18111 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm25894-201ENSMUST00000083458 75 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Mir186-201ENSMUST00000083497 71 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm24121-201ENSMUST00000102029 106 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Gm25223-201ENSMUST00000158200 110 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Gm23821-201ENSMUST00000158738 106 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir6342-201ENSMUST00000183870 125 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir6928-201ENSMUST00000185166 70 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir721-201ENSMUST00000200230 88 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Gm22738-201ENSMUST00000083440 147 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir200a-201ENSMUST00000083466 90 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir377-201ENSMUST00000083504 68 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir411-201ENSMUST00000083543 82 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Gm10172-201ENSMUST00000085929 558 ntBASIC0.07□□□□□ -2.4
Cdx1P18111 Mir466p-201ENSMUST00000103925 89 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm23881-201ENSMUST00000116872 66 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm22079-201ENSMUST00000157592 106 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm22433-201ENSMUST00000158550 142 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm25769-201ENSMUST00000158569 127 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm23917-201ENSMUST00000175256 98 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Snora15-201ENSMUST00000177461 131 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm27993-201ENSMUST00000184362 85 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm5002-201ENSMUST00000207145 223 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm8508-201ENSMUST00000061226 363 ntBASIC0.06□□□□□ -2.4
Cdx1P18111 Gm24276-201ENSMUST00000102181 110 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm15654-201ENSMUST00000152660 300 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm22962-201ENSMUST00000157962 73 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm22946-201ENSMUST00000158558 82 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm10548-202ENSMUST00000165672 272 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm24321-201ENSMUST00000175348 80 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Mir30f-201ENSMUST00000196073 92 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.05□□□□□ -2.4
Cdx1P18111 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm23301-201ENSMUST00000082713 65 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Snord60-201ENSMUST00000082834 78 ntBASIC0.05□□□□□ -2.4
Cdx1P18111 Gm22850-201ENSMUST00000157714 82 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm23892-201ENSMUST00000158105 130 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm24729-201ENSMUST00000158225 137 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm23857-201ENSMUST00000158379 111 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm25654-201ENSMUST00000158467 88 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm26158-201ENSMUST00000158973 119 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Mir3105-201ENSMUST00000175480 85 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm37330-201ENSMUST00000192606 153 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm44807-201ENSMUST00000206115 154 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Gm22744-201ENSMUST00000083444 65 ntBASIC0.04□□□□□ -2.4
Cdx1P18111 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Cdx1P18111 Gm23772-201ENSMUST00000104433 102 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Gm25364-201ENSMUST00000158851 107 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Gm16550-201ENSMUST00000162550 126 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Gm28001-201ENSMUST00000183561 117 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Gm37586-201ENSMUST00000193654 204 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Snord82-201ENSMUST00000082889 70 ntBASIC0.03□□□□□ -2.4
Cdx1P18111 Gm24278-201ENSMUST00000104239 127 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm25390-201ENSMUST00000157341 103 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm22612-201ENSMUST00000158293 101 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm26360-201ENSMUST00000158872 103 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm23141-201ENSMUST00000178682 94 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm29535-201ENSMUST00000185723 109 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm28143-201ENSMUST00000191082 109 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Cdx1P18111 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.02□□□□□ -2.41
Cdx1P18111 Mir670-201ENSMUST00000102380 100 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm25408-201ENSMUST00000104104 133 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm22557-201ENSMUST00000157804 102 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm25693-201ENSMUST00000175443 85 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm25397-201ENSMUST00000176951 92 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm44469-201ENSMUST00000198558 79 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Mir6915-201ENSMUST00000198839 69 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.01□□□□□ -2.41
Cdx1P18111 Gm12469-201ENSMUST00000117623 207 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm11936-201ENSMUST00000118323 160 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm24290-201ENSMUST00000157634 96 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm27943-201ENSMUST00000184844 116 ntBASIC0□□□□□ -2.41
Cdx1P18111 Mir3969-201ENSMUST00000197106 92 ntBASIC0□□□□□ -2.41
Cdx1P18111 Mir1949-202ENSMUST00000199259 70 ntBASIC0□□□□□ -2.41
Cdx1P18111 AC154245.1-201ENSMUST00000224615 601 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Cdx1P18111 Mir201-201ENSMUST00000083470 66 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0□□□□□ -2.41
Cdx1P18111 Mir489-201ENSMUST00000093599 107 ntBASIC0□□□□□ -2.41
Cdx1P18111 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Cdx1P18111 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.01□□□□□ -2.41
Cdx1P18111 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms