Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm25044-201ENSMUST00000158603 104 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm16539-201ENSMUST00000160086 327 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Mir5104-201ENSMUST00000175319 94 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm23714-201ENSMUST00000179259 105 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Mir7021-201ENSMUST00000197026 63 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Gm23244-201ENSMUST00000083375 92 ntBASIC1.53□□□□□ -2.16
Lmx1bO88609 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
Lmx1bO88609 Gm15692-201ENSMUST00000152173 352 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Gm24947-201ENSMUST00000158334 110 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Gm27517-201ENSMUST00000184347 236 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Gm18433-201ENSMUST00000192747 197 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.52□□□□□ -2.17
Lmx1bO88609 Gm24649-201ENSMUST00000157106 134 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 Gm25887-201ENSMUST00000157777 84 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 Gm23384-201ENSMUST00000158593 103 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 Gm21885-201ENSMUST00000178891 327 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 Gm5900-201ENSMUST00000179862 375 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.51□□□□□ -2.17
Lmx1bO88609 Mir148b-201ENSMUST00000083626 97 ntBASIC1.51□□□□□ -2.17
Lmx1bO88609 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Lmx1bO88609 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Lmx1bO88609 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.5□□□□□ -2.17
Lmx1bO88609 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.5□□□□□ -2.17
Lmx1bO88609 U6.1-201ENSMUST00000157443 101 ntBASIC1.5□□□□□ -2.17
Lmx1bO88609 Gm25329-201ENSMUST00000158041 126 ntBASIC1.5□□□□□ -2.17
Lmx1bO88609 Gm25838-201ENSMUST00000158920 120 ntBASIC1.5□□□□□ -2.17
Lmx1bO88609 Gm45754-201ENSMUST00000212380 279 ntBASIC1.5□□□□□ -2.17
Lmx1bO88609 Gm26080-201ENSMUST00000104069 131 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm22319-201ENSMUST00000157147 122 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm22212-201ENSMUST00000158096 106 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm22429-201ENSMUST00000158553 130 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm16550-201ENSMUST00000162550 126 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm22403-201ENSMUST00000174919 84 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Snora24-201ENSMUST00000174989 130 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm28256-201ENSMUST00000188953 139 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm28559-201ENSMUST00000190532 139 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm24151-201ENSMUST00000082758 141 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm24805-201ENSMUST00000082931 104 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Gm23100-201ENSMUST00000083455 141 ntBASIC1.49□□□□□ -2.17
Lmx1bO88609 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Lmx1bO88609 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.48□□□□□ -2.17
Lmx1bO88609 Gm22200-201ENSMUST00000158614 67 ntBASIC1.48□□□□□ -2.17
Lmx1bO88609 Mir3061-201ENSMUST00000175129 91 ntBASIC1.48□□□□□ -2.17
Lmx1bO88609 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.48□□□□□ -2.17
Lmx1bO88609 Gm23299-201ENSMUST00000082708 79 ntBASIC1.48□□□□□ -2.17
Lmx1bO88609 Gm11248-201ENSMUST00000119568 201 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm23986-201ENSMUST00000157144 63 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm26181-201ENSMUST00000157687 106 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm25831-201ENSMUST00000158924 163 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm27511-201ENSMUST00000183502 127 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm28383-201ENSMUST00000187563 139 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm42935-201ENSMUST00000202004 151 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.47□□□□□ -2.17
Lmx1bO88609 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Lmx1bO88609 Gm24379-201ENSMUST00000122695 86 ntBASIC1.46□□□□□ -2.18
Lmx1bO88609 Gm25423-201ENSMUST00000157609 107 ntBASIC1.46□□□□□ -2.18
Lmx1bO88609 Gm23967-201ENSMUST00000175062 78 ntBASIC1.46□□□□□ -2.18
Lmx1bO88609 Mir21c-201ENSMUST00000184910 78 ntBASIC1.46□□□□□ -2.18
Lmx1bO88609 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
Lmx1bO88609 Gm15654-201ENSMUST00000152660 300 ntBASIC1.45□□□□□ -2.18
Lmx1bO88609 Gm23838-201ENSMUST00000158067 162 ntBASIC1.45□□□□□ -2.18
Lmx1bO88609 Mir8119-201ENSMUST00000183371 129 ntBASIC1.45□□□□□ -2.18
Lmx1bO88609 Mir320-201ENSMUST00000083594 82 ntBASIC1.45□□□□□ -2.18
Lmx1bO88609 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Lmx1bO88609 Gm15115-201ENSMUST00000121145 264 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm26253-201ENSMUST00000122493 103 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm23601-201ENSMUST00000157259 131 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm24902-201ENSMUST00000158126 123 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm23351-201ENSMUST00000158427 125 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.44□□□□□ -2.18
Lmx1bO88609 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Snord14a-201ENSMUST00000082807 87 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm24524-201ENSMUST00000082925 170 ntBASIC1.44□□□□□ -2.18
Lmx1bO88609 Gm14882-201ENSMUST00000117216 218 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm16265-201ENSMUST00000134558 108 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm24509-201ENSMUST00000157086 101 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm25358-201ENSMUST00000157189 101 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm24229-201ENSMUST00000158830 118 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm22802-201ENSMUST00000175621 89 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Mir6351-201ENSMUST00000183826 99 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Mir6240-201ENSMUST00000184281 117 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm43977-201ENSMUST00000203970 189 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm44932-201ENSMUST00000206799 121 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.43□□□□□ -2.18
Lmx1bO88609 Gm25038-201ENSMUST00000082928 130 ntBASIC1.43□□□□□ -2.18
Lmx1bO88609 Mir544-201ENSMUST00000103813 78 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm23170-201ENSMUST00000157158 106 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm24174-201ENSMUST00000158933 111 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm25035-201ENSMUST00000175414 77 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm27326-201ENSMUST00000183504 95 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm27265-201ENSMUST00000183559 77 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Mir6369-201ENSMUST00000183772 106 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.42□□□□□ -2.18
Lmx1bO88609 Gm25022-201ENSMUST00000102205 83 ntBASIC1.41□□□□□ -2.18
Lmx1bO88609 Mir802-201ENSMUST00000103258 97 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms