Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm23678-201ENSMUST00000083157 107 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col5a1O88207 Gm23531-201ENSMUST00000104567 68 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm14626-201ENSMUST00000117619 216 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm14568-201ENSMUST00000119321 294 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm22796-201ENSMUST00000157234 106 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm26412-201ENSMUST00000157666 55 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm26084-201ENSMUST00000157903 104 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm24054-201ENSMUST00000158619 105 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm25364-201ENSMUST00000158851 107 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.57□□□□□ -2.32
Col5a1O88207 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col5a1O88207 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm26224-201ENSMUST00000082506 80 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Mir451a-201ENSMUST00000093557 72 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Mir547-201ENSMUST00000102051 78 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm22105-201ENSMUST00000116734 116 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.57□□□□□ -2.32
Col5a1O88207 Gm22074-201ENSMUST00000158595 113 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Mir6377-201ENSMUST00000183760 114 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Col5a1O88207 Mir7657-201ENSMUST00000196051 57 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm25128-201ENSMUST00000083339 76 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm25650-201ENSMUST00000083784 162 ntBASIC0.57□□□□□ -2.32
Col5a1O88207 Gm24747-201ENSMUST00000157835 87 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm26090-201ENSMUST00000157897 128 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm23859-201ENSMUST00000158383 64 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm20391-201ENSMUST00000174722 106 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm23375-201ENSMUST00000175407 83 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm23567-201ENSMUST00000178005 107 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.56□□□□□ -2.32
Col5a1O88207 Gm26018-201ENSMUST00000104406 128 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Gm15654-201ENSMUST00000152660 300 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Gm24880-201ENSMUST00000158776 85 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Gm22802-201ENSMUST00000175621 89 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Mir6896-201ENSMUST00000198033 73 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Gm44470-201ENSMUST00000203913 142 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Gm23445-201ENSMUST00000082800 107 ntBASIC0.55□□□□□ -2.32
Col5a1O88207 Mir654-201ENSMUST00000104787 84 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm22079-201ENSMUST00000157592 106 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm27851-201ENSMUST00000183529 63 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm38274-201ENSMUST00000195689 148 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm43381-201ENSMUST00000198553 165 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm23303-201ENSMUST00000082714 152 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm23947-201ENSMUST00000093636 107 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm26076-201ENSMUST00000104065 105 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm22785-201ENSMUST00000104087 132 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm24141-201ENSMUST00000122776 115 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm26038-201ENSMUST00000158151 106 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm22200-201ENSMUST00000158614 67 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm26236-201ENSMUST00000175536 137 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Mir21b-201ENSMUST00000184317 108 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Gm18665-201ENSMUST00000189783 270 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.54□□□□□ -2.32
Col5a1O88207 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Col5a1O88207 Gm25544-201ENSMUST00000122676 120 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm23170-201ENSMUST00000157158 106 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm23253-201ENSMUST00000157441 104 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm23339-201ENSMUST00000158962 139 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm28256-201ENSMUST00000188953 139 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm28559-201ENSMUST00000190532 139 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm44807-201ENSMUST00000206115 154 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Gm45492-201ENSMUST00000211611 288 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.53□□□□□ -2.32
Col5a1O88207 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Col5a1O88207 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm23907-201ENSMUST00000104595 189 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22999-201ENSMUST00000157082 88 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22815-201ENSMUST00000157451 62 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22164-201ENSMUST00000158413 106 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm26291-201ENSMUST00000158889 137 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm38113-201ENSMUST00000193704 201 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22809-201ENSMUST00000082743 156 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm24527-201ENSMUST00000082920 107 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22297-201ENSMUST00000083312 106 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm10172-201ENSMUST00000085929 558 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.52□□□□□ -2.33
Col5a1O88207 Gm25610-201ENSMUST00000104016 129 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm6272-201ENSMUST00000121256 171 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm25428-201ENSMUST00000157608 114 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22842-201ENSMUST00000157709 118 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm24238-201ENSMUST00000157792 98 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22349-201ENSMUST00000157864 107 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm22914-201ENSMUST00000175195 77 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm27420-201ENSMUST00000183823 79 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm26454-201ENSMUST00000082682 107 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm26207-201ENSMUST00000082909 104 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm10351-201ENSMUST00000087694 125 ntBASIC0.52□□□□□ -2.33
Col5a1O88207 Gm24271-201ENSMUST00000102327 111 ntBASIC0.51□□□□□ -2.33
Col5a1O88207 Gm26420-201ENSMUST00000104273 103 ntBASIC0.51□□□□□ -2.33
Col5a1O88207 Gm44489-201ENSMUST00000104619 97 ntBASIC0.51□□□□□ -2.33
Col5a1O88207 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms