Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm22425-201ENSMUST00000158532 138 ntBASIC1.11□□□□□ -2.23
Cldn4O35054 Gm27419-201ENSMUST00000184576 109 ntBASIC1.11□□□□□ -2.23
Cldn4O35054 Gm44385-201ENSMUST00000198781 81 ntBASIC1.11□□□□□ -2.23
Cldn4O35054 Gm25920-201ENSMUST00000158307 99 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Gm22074-201ENSMUST00000158595 113 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Gm22980-201ENSMUST00000082608 70 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Gm26123-201ENSMUST00000083363 135 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Mir22-201ENSMUST00000083595 95 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.1□□□□□ -2.23
Cldn4O35054 Snord71-201ENSMUST00000104361 85 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm24718-201ENSMUST00000157521 136 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm22384-201ENSMUST00000158187 104 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm22914-201ENSMUST00000175195 77 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm44490-201ENSMUST00000198566 127 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm42795-201ENSMUST00000198847 76 ntBASIC1.09□□□□□ -2.23
Cldn4O35054 Gm16186-201ENSMUST00000120132 216 ntBASIC1.08□□□□□ -2.24
Cldn4O35054 Mir3094-201ENSMUST00000175121 64 ntBASIC1.08□□□□□ -2.24
Cldn4O35054 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Cldn4O35054 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.07□□□□□ -2.24
Cldn4O35054 Gm26224-201ENSMUST00000082506 80 ntBASIC1.07□□□□□ -2.24
Cldn4O35054 Gm25812-201ENSMUST00000082751 103 ntBASIC1.07□□□□□ -2.24
Cldn4O35054 Gm25650-201ENSMUST00000083784 162 ntBASIC1.07□□□□□ -2.24
Cldn4O35054 Mir1904-201ENSMUST00000122702 80 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Gm22815-201ENSMUST00000157451 62 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Gm22802-201ENSMUST00000175621 89 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Gm22887-201ENSMUST00000178586 107 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Mir6377-201ENSMUST00000183760 114 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Mir200b-201ENSMUST00000083615 70 ntBASIC1.06□□□□□ -2.24
Cldn4O35054 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Cldn4O35054 Mir547-201ENSMUST00000102051 78 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Cldn4O35054 Gm24509-201ENSMUST00000157086 101 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Gm25358-201ENSMUST00000157189 101 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Gm25623-201ENSMUST00000157216 108 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Gm24777-201ENSMUST00000157644 107 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Gm22565-201ENSMUST00000175540 69 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Mir6985-201ENSMUST00000184641 61 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Gm44458-201ENSMUST00000196594 143 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Mir532-201ENSMUST00000093630 96 ntBASIC1.05□□□□□ -2.24
Cldn4O35054 Snord64-201ENSMUST00000104003 67 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm25610-201ENSMUST00000104016 129 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm22451-201ENSMUST00000122803 151 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm22233-201ENSMUST00000157464 114 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm24808-201ENSMUST00000157993 118 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm22381-201ENSMUST00000158186 107 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm25868-201ENSMUST00000158253 114 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm38298-201ENSMUST00000193578 118 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm44807-201ENSMUST00000206115 154 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm22809-201ENSMUST00000082743 156 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm23138-201ENSMUST00000083365 103 ntBASIC1.04□□□□□ -2.24
Cldn4O35054 Gm15289-201ENSMUST00000117793 244 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Gm24246-201ENSMUST00000157315 132 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Gm25367-201ENSMUST00000158846 106 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Gm26363-201ENSMUST00000158866 83 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Mir7657-201ENSMUST00000196051 57 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Snora41-201ENSMUST00000082668 132 ntBASIC1.03□□□□□ -2.24
Cldn4O35054 Gm24401-201ENSMUST00000157868 91 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm23044-201ENSMUST00000157891 100 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm23838-201ENSMUST00000158067 162 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm27420-201ENSMUST00000183823 79 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm20118-201ENSMUST00000187207 162 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm44462-201ENSMUST00000199696 129 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Mir27b-201ENSMUST00000083541 73 ntBASIC1.02□□□□□ -2.25
Cldn4O35054 Gm24342-201ENSMUST00000103907 104 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Mir1961-201ENSMUST00000158643 112 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Mir6369-201ENSMUST00000183772 106 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Mir468-201ENSMUST00000197332 78 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Gm44396-201ENSMUST00000199843 114 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Gm25128-201ENSMUST00000083339 76 ntBASIC1.01□□□□□ -2.25
Cldn4O35054 Gm25091-201ENSMUST00000103997 71 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm24605-201ENSMUST00000104772 96 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm14039-201ENSMUST00000118705 101 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm15654-201ENSMUST00000152660 300 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm16550-201ENSMUST00000162550 126 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1□□□□□ -2.25
Cldn4O35054 Mir10b-201ENSMUST00000083566 68 ntBASIC1□□□□□ -2.25
Cldn4O35054 Gm25006-201ENSMUST00000083813 107 ntBASIC1□□□□□ -2.25
Cldn4O35054 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cldn4O35054 Gm23114-201ENSMUST00000158478 117 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 Gm44948-201ENSMUST00000209050 149 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 Gm25851-201ENSMUST00000082794 107 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 Mir344-201ENSMUST00000083634 95 ntBASIC0.99□□□□□ -2.25
Cldn4O35054 Gm24271-201ENSMUST00000102327 111 ntBASIC0.98□□□□□ -2.25
Cldn4O35054 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Cldn4O35054 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Cldn4O35054 Gm25329-201ENSMUST00000158041 126 ntBASIC0.98□□□□□ -2.25
Cldn4O35054 Gm24547-201ENSMUST00000158649 149 ntBASIC0.98□□□□□ -2.25
Cldn4O35054 Gm24221-201ENSMUST00000158833 313 ntBASIC0.98□□□□□ -2.25
Cldn4O35054 Gm16307-201ENSMUST00000161269 210 ntBASIC0.98□□□□□ -2.25
Cldn4O35054 Gm25496-201ENSMUST00000104430 120 ntBASIC0.97□□□□□ -2.25
Cldn4O35054 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Cldn4O35054 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.97□□□□□ -2.25
Cldn4O35054 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.97□□□□□ -2.25
Cldn4O35054 Gm24916-201ENSMUST00000157287 79 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms