Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm25769-201ENSMUST00000158569 127 ntBASIC-2.02□□□□□ -2.73
Trav4-3A0A0B4J1K1 Mir465d-201ENSMUST00000196314 58 ntBASIC-2.02□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm24921-201ENSMUST00000083024 107 ntBASIC-2.02□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm22834-201ENSMUST00000102021 79 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm11694-201ENSMUST00000118637 159 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm24197-201ENSMUST00000175085 109 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 Snord116l12-201ENSMUST00000179816 94 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 AC122335.1-201ENSMUST00000217587 175 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 AC116589.1-201ENSMUST00000220634 327 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 AC164117.2-201ENSMUST00000222090 327 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm25652-201ENSMUST00000083780 103 ntBASIC-2.03□□□□□ -2.73
Trav4-3A0A0B4J1K1 Gm25848-201ENSMUST00000116790 144 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24649-201ENSMUST00000157106 134 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm25473-201ENSMUST00000180191 107 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm29512-201ENSMUST00000185544 315 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 AC132437.1-201ENSMUST00000218308 320 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm35558-203ENSMUST00000222264 204 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24459-201ENSMUST00000082730 86 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Snora19-201ENSMUST00000082962 132 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm23658-201ENSMUST00000083233 132 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24453-201ENSMUST00000083346 76 ntBASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-2.04□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24275-201ENSMUST00000116780 146 ntBASIC-2.05□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm23900-201ENSMUST00000157569 108 ntBASIC-2.05□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24238-201ENSMUST00000157792 98 ntBASIC-2.05□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24006-201ENSMUST00000158462 132 ntBASIC-2.05□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir543-201ENSMUST00000102286 76 ntBASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm22543-201ENSMUST00000104347 94 ntBASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm22638-201ENSMUST00000179674 107 ntBASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm27977-201ENSMUST00000185159 111 ntBASIC-2.06□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm23640-201ENSMUST00000157860 104 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm25712-201ENSMUST00000158634 93 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm26398-201ENSMUST00000179015 127 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir6905-201ENSMUST00000184228 70 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm42935-201ENSMUST00000202004 151 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm7240-201ENSMUST00000220769 664 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm26495-201ENSMUST00000083152 137 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Snord57-201ENSMUST00000083338 72 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm26164-201ENSMUST00000083793 104 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24522-201ENSMUST00000083964 108 ntBASIC-2.07□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm26420-201ENSMUST00000104273 103 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm23601-201ENSMUST00000157259 131 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir496b-201ENSMUST00000184935 113 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir136-201ENSMUST00000199494 62 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm24091-201ENSMUST00000082550 83 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir350-201ENSMUST00000083639 99 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm23711-201ENSMUST00000083856 83 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm26107-201ENSMUST00000083972 107 ntBASIC-2.08□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm22733-201ENSMUST00000158094 91 ntBASIC-2.09□□□□□ -2.74
Trav4-3A0A0B4J1K1 Mir6928-201ENSMUST00000185166 70 ntBASIC-2.09□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm28506-201ENSMUST00000189937 150 ntBASIC-2.09□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm42773-201ENSMUST00000196962 148 ntBASIC-2.09□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm44726-201ENSMUST00000203427 217 ntBASIC-2.09□□□□□ -2.74
Trav4-3A0A0B4J1K1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-2.1□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23845-201ENSMUST00000083834 152 ntBASIC-2.1□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm24064-201ENSMUST00000157486 106 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23901-201ENSMUST00000157570 107 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23022-201ENSMUST00000158768 180 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 AC116589.4-201ENSMUST00000222390 216 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 CT030166.3-201ENSMUST00000223203 193 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23974-201ENSMUST00000083321 131 ntBASIC-2.11□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm14533-201ENSMUST00000117088 93 ntBASIC-2.12□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.12□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm25142-201ENSMUST00000082698 107 ntBASIC-2.12□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm24203-201ENSMUST00000082949 114 ntBASIC-2.12□□□□□ -2.75
Trav4-3A0A0B4J1K1 Mir369-201ENSMUST00000083627 79 ntBASIC-2.12□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm22145-201ENSMUST00000157396 148 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm26482-201ENSMUST00000158015 62 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm22612-201ENSMUST00000158293 101 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23630-201ENSMUST00000175292 104 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 AC124687.1-201ENSMUST00000221868 189 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 n-R5s94-201ENSMUST00000082573 119 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23515-201ENSMUST00000082829 107 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm26329-201ENSMUST00000093723 110 ntBASIC-2.13□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm23142-201ENSMUST00000101848 105 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm26240-201ENSMUST00000101893 105 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm22591-201ENSMUST00000104243 106 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm25664-201ENSMUST00000157697 107 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm22430-201ENSMUST00000158546 107 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm27410-201ENSMUST00000183851 115 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm22686-201ENSMUST00000082847 100 ntBASIC-2.14□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm25875-201ENSMUST00000104323 107 ntBASIC-2.15□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm25450-201ENSMUST00000179144 107 ntBASIC-2.15□□□□□ -2.75
Trav4-3A0A0B4J1K1 Mir3969-201ENSMUST00000197106 92 ntBASIC-2.15□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm44959-201ENSMUST00000209127 231 ntBASIC-2.15□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm26456-201ENSMUST00000082831 111 ntBASIC-2.15□□□□□ -2.75
Trav4-3A0A0B4J1K1 Gm24867-201ENSMUST00000104161 107 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm14567-201ENSMUST00000117155 174 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm25559-201ENSMUST00000157182 74 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm25364-201ENSMUST00000158851 107 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm44589-201ENSMUST00000207025 115 ntBASIC-2.16□□□□□ -2.76
Trav4-3A0A0B4J1K1 Gm44563-201ENSMUST00000207958 178 ntBASIC-2.16□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms