Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm44457-201ENSMUST00000198109 76 ntBASIC0,3□□□□□ -2,36
Trav5-4A0A075B652 Gm23622-201ENSMUST00000082460 107 ntBASIC0,3□□□□□ -2,36
Trav5-4A0A075B652 Gm25482-201ENSMUST00000083225 107 ntBASIC0,3□□□□□ -2,36
Trav5-4A0A075B652 Gm14626-201ENSMUST00000117619 216 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm10548-202ENSMUST00000165672 272 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm22239-201ENSMUST00000175220 103 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm23917-201ENSMUST00000175256 98 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm27475-201ENSMUST00000183420 61 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm27285-201ENSMUST00000183875 127 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Mir7065-201ENSMUST00000185110 61 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Mir7657-201ENSMUST00000196051 57 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm5002-201ENSMUST00000207145 223 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 AC211878.4-201ENSMUST00000220970 262 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Mir377-201ENSMUST00000083504 68 ntBASIC0,29□□□□□ -2,36
Trav5-4A0A075B652 Gm22520-201ENSMUST00000158269 129 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Gm26158-201ENSMUST00000158973 119 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Gm24761-201ENSMUST00000179589 127 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Gm28724-201ENSMUST00000186149 625 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Mir3969-201ENSMUST00000197106 92 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Gm3702-201ENSMUST00000211754 346 ntBASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0,28□□□□□ -2,36
Trav5-4A0A075B652 Gm13577-201ENSMUST00000121365 205 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm22258-201ENSMUST00000177645 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm26032-201ENSMUST00000178535 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm25210-201ENSMUST00000178813 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm25157-201ENSMUST00000178914 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm22046-201ENSMUST00000179027 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm22941-201ENSMUST00000179630 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm25471-201ENSMUST00000180126 94 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Mir7229-201ENSMUST00000197062 53 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm43381-201ENSMUST00000198553 165 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm44469-201ENSMUST00000198558 79 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 AC159093.2-201ENSMUST00000227881 297 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm23969-201ENSMUST00000083324 74 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Mir344-201ENSMUST00000083634 95 ntBASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0,27□□□□□ -2,37
Trav5-4A0A075B652 Gm23857-201ENSMUST00000158379 111 ntBASIC0,26□□□□□ -2,37
Trav5-4A0A075B652 Gm27446-201ENSMUST00000183963 89 ntBASIC0,26□□□□□ -2,37
Trav5-4A0A075B652 Gm44455-201ENSMUST00000200061 82 ntBASIC0,26□□□□□ -2,37
Trav5-4A0A075B652 Gm44828-201ENSMUST00000203745 106 ntBASIC0,26□□□□□ -2,37
Trav5-4A0A075B652 Mir488-201ENSMUST00000093595 109 ntBASIC0,26□□□□□ -2,37
Trav5-4A0A075B652 Mir20b-201ENSMUST00000102087 80 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm24640-201ENSMUST00000116949 126 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm22626-201ENSMUST00000116990 126 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm14502-201ENSMUST00000118154 113 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm23859-201ENSMUST00000158383 64 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm20409-201ENSMUST00000173457 130 ntBASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0,25□□□□□ -2,37
Trav5-4A0A075B652 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Gm26152-201ENSMUST00000157427 101 ntBASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Mir6342-201ENSMUST00000183870 125 ntBASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Gm27465-201ENSMUST00000184290 91 ntBASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Gm44308-201ENSMUST00000197080 99 ntBASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Gm45002-201ENSMUST00000208045 120 ntBASIC0,24□□□□□ -2,37
Trav5-4A0A075B652 Gm24833-201ENSMUST00000116775 120 ntBASIC0,23□□□□□ -2,37
Trav5-4A0A075B652 Gm12469-201ENSMUST00000117623 207 ntBASIC0,23□□□□□ -2,37
Trav5-4A0A075B652 Gm27943-201ENSMUST00000184844 116 ntBASIC0,23□□□□□ -2,37
Trav5-4A0A075B652 mt-Ta-201ENSMUST00000082398 69 ntBASIC0,23□□□□□ -2,37
Trav5-4A0A075B652 Gm25894-201ENSMUST00000083458 75 ntBASIC0,23□□□□□ -2,37
Trav5-4A0A075B652 Scarna8-201ENSMUST00000158333 131 ntBASIC0,22□□□□□ -2,37
Trav5-4A0A075B652 Gm24321-201ENSMUST00000175348 80 ntBASIC0,22□□□□□ -2,37
Trav5-4A0A075B652 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0,22□□□□□ -2,37
Trav5-4A0A075B652 Gm23321-201ENSMUST00000104465 126 ntBASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm25693-201ENSMUST00000175443 85 ntBASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Snord80-202ENSMUST00000199023 77 ntBASIC0,21□□□□□ -2,38
Trav5-4A0A075B652 Gm24342-201ENSMUST00000103907 104 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm24232-201ENSMUST00000104314 132 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm22149-201ENSMUST00000104442 136 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm25329-201ENSMUST00000158041 126 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Mir6365-201ENSMUST00000183990 101 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm29535-201ENSMUST00000185723 109 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm18665-201ENSMUST00000189783 270 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm28143-201ENSMUST00000191082 109 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Trbv25-201ENSMUST00000194700 273 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 AC124739.2-201ENSMUST00000222201 109 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm26204-201ENSMUST00000082906 107 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0,2□□□□□ -2,38
Trav5-4A0A075B652 Gm43885-201ENSMUST00000204928 2542 ntBASIC0,19□□□□□ -2,38
Trav5-4A0A075B652 Mir1191-201ENSMUST00000116883 120 ntBASIC0,19□□□□□ -2,38
Trav5-4A0A075B652 Gm22541-201ENSMUST00000158165 127 ntBASIC0,19□□□□□ -2,38
Trav5-4A0A075B652 Mir3108-201ENSMUST00000175500 79 ntBASIC0,19□□□□□ -2,38
Trav5-4A0A075B652 Gm24278-201ENSMUST00000104239 127 ntBASIC0,18□□□□□ -2,38
Trav5-4A0A075B652 Gm16186-201ENSMUST00000120132 216 ntBASIC0,18□□□□□ -2,38
Trav5-4A0A075B652 Gm24290-201ENSMUST00000157634 96 ntBASIC0,18□□□□□ -2,38
Trav5-4A0A075B652 Gm42623-201ENSMUST00000197225 379 ntBASIC0,18□□□□□ -2,38
Trav5-4A0A075B652 Mir710-201ENSMUST00000102088 110 ntBASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0,17□□□□□ -2,38
Trav5-4A0A075B652 Gm23126-201ENSMUST00000104260 134 ntBASIC0,17□□□□□ -2,38
Retrieved 100 of 76,532 protein–RNA pairs in 168,8 ms