Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.3□□□□□ -2.36
Upk3aQ9JKX8 Gm25588-201ENSMUST00000082501 140 ntBASIC0.3□□□□□ -2.36
Upk3aQ9JKX8 Gm24276-201ENSMUST00000102181 110 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Mir466p-201ENSMUST00000103925 89 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm25718-201ENSMUST00000158632 118 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm16550-201ENSMUST00000162550 126 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm25141-201ENSMUST00000083177 107 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm22744-201ENSMUST00000083444 65 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Mir186-201ENSMUST00000083497 71 ntBASIC0.29□□□□□ -2.36
Upk3aQ9JKX8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 Gm25654-201ENSMUST00000158467 88 ntBASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.28□□□□□ -2.36
Upk3aQ9JKX8 Gm22850-201ENSMUST00000157714 82 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm25769-201ENSMUST00000158569 127 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm23141-201ENSMUST00000178682 94 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm24488-201ENSMUST00000179934 127 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm25701-201ENSMUST00000179988 127 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm26431-201ENSMUST00000180199 127 ntBASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Upk3aQ9JKX8 Mir669l-201ENSMUST00000103771 98 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm26420-201ENSMUST00000104273 103 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm24729-201ENSMUST00000158225 137 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Mir100-201ENSMUST00000175270 80 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm42795-201ENSMUST00000198847 76 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm23378-201ENSMUST00000082942 107 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
Upk3aQ9JKX8 Gm22790-201ENSMUST00000157229 129 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm23545-201ENSMUST00000158205 104 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm25749-201ENSMUST00000175485 111 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm22951-201ENSMUST00000179471 107 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Mir200b-201ENSMUST00000083615 70 ntBASIC0.25□□□□□ -2.37
Upk3aQ9JKX8 Gm22946-201ENSMUST00000158558 82 ntBASIC0.24□□□□□ -2.37
Upk3aQ9JKX8 Gm37889-201ENSMUST00000194174 251 ntBASIC0.24□□□□□ -2.37
Upk3aQ9JKX8 Snord82-201ENSMUST00000082889 70 ntBASIC0.24□□□□□ -2.37
Upk3aQ9JKX8 Mir411-201ENSMUST00000083543 82 ntBASIC0.24□□□□□ -2.37
Upk3aQ9JKX8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.24□□□□□ -2.37
Upk3aQ9JKX8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Mir224-201ENSMUST00000083608 82 ntBASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Upk3aQ9JKX8 Gm22332-201ENSMUST00000158072 126 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Gm26360-201ENSMUST00000158872 103 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Gm37116-201ENSMUST00000195161 147 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.22□□□□□ -2.37
Upk3aQ9JKX8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 Gm25390-201ENSMUST00000157341 103 ntBASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 Gm22079-201ENSMUST00000157592 106 ntBASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 Mir6928-201ENSMUST00000185166 70 ntBASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.21□□□□□ -2.38
Upk3aQ9JKX8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir1197-201ENSMUST00000117037 120 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir7229-201ENSMUST00000197062 53 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir721-201ENSMUST00000200230 88 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Gm44807-201ENSMUST00000206115 154 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Gm8508-201ENSMUST00000061226 363 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Gm22287-201ENSMUST00000083197 107 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.2□□□□□ -2.38
Upk3aQ9JKX8 Mir710-201ENSMUST00000102088 110 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm23060-201ENSMUST00000102345 109 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm25610-201ENSMUST00000104016 129 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm22557-201ENSMUST00000157804 102 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm27579-201ENSMUST00000158113 63 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm37586-201ENSMUST00000193654 204 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm44455-201ENSMUST00000200061 82 ntBASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Upk3aQ9JKX8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.18□□□□□ -2.38
Upk3aQ9JKX8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms