Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm8508-201ENSMUST00000061226 363 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm24460-201ENSMUST00000082731 106 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm25895-201ENSMUST00000083714 100 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm23749-201ENSMUST00000104223 131 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm23841-201ENSMUST00000116951 114 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm26026-201ENSMUST00000122726 123 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm25720-201ENSMUST00000157503 105 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm23036-201ENSMUST00000157885 99 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Mir186-201ENSMUST00000083497 71 ntBASIC0.2□□□□□ -2.38
Lmx1aQ9JKU8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Snord19-201ENSMUST00000104609 76 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm14567-201ENSMUST00000117155 174 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm12686-201ENSMUST00000120546 397 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm28020-201ENSMUST00000157739 67 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm25444-201ENSMUST00000158999 113 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm27476-201ENSMUST00000183366 104 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm42623-201ENSMUST00000197225 379 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm22753-201ENSMUST00000083657 107 ntBASIC0.19□□□□□ -2.38
Lmx1aQ9JKU8 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Snord100-201ENSMUST00000116836 74 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm22815-201ENSMUST00000157451 62 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm25769-201ENSMUST00000158569 127 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm24762-201ENSMUST00000083689 104 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Gm10172-201ENSMUST00000085929 558 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Mir489-201ENSMUST00000093599 107 ntBASIC0.18□□□□□ -2.38
Lmx1aQ9JKU8 Mir541-201ENSMUST00000102097 90 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm6897-201ENSMUST00000117714 138 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm14758-201ENSMUST00000119104 138 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm22790-201ENSMUST00000157229 129 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm24729-201ENSMUST00000158225 137 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm25015-201ENSMUST00000158400 128 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm23047-201ENSMUST00000177661 94 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Mir6390-201ENSMUST00000184405 129 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm25588-201ENSMUST00000082501 140 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm22744-201ENSMUST00000083444 65 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.17□□□□□ -2.38
Lmx1aQ9JKU8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm26420-201ENSMUST00000104273 103 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm23987-201ENSMUST00000117039 129 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm22557-201ENSMUST00000157804 102 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm22520-201ENSMUST00000158269 129 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm24488-201ENSMUST00000179934 127 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm25701-201ENSMUST00000179988 127 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm26431-201ENSMUST00000180199 127 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm26207-201ENSMUST00000082909 104 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.16□□□□□ -2.38
Lmx1aQ9JKU8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Gm26279-201ENSMUST00000157095 102 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Gm22145-201ENSMUST00000157396 148 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Gm23892-201ENSMUST00000158105 130 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Gm27905-201ENSMUST00000184005 207 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Gm44989-201ENSMUST00000204749 217 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Mir382-201ENSMUST00000083494 76 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 Mir411-201ENSMUST00000083543 82 ntBASIC0.15□□□□□ -2.39
Lmx1aQ9JKU8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm24250-201ENSMUST00000157320 135 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm23567-201ENSMUST00000178005 107 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm23770-201ENSMUST00000178009 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm22832-201ENSMUST00000178022 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm23863-201ENSMUST00000178265 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm24828-201ENSMUST00000178507 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm23052-201ENSMUST00000178633 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm25729-201ENSMUST00000179050 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm25359-201ENSMUST00000179315 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm22624-201ENSMUST00000179913 108 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Mir6365-201ENSMUST00000183990 101 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Gm42795-201ENSMUST00000198847 76 ntBASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.14□□□□□ -2.39
Lmx1aQ9JKU8 Mir670-201ENSMUST00000102380 100 ntBASIC0.13□□□□□ -2.39
Lmx1aQ9JKU8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.13□□□□□ -2.39
Lmx1aQ9JKU8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.13□□□□□ -2.39
Lmx1aQ9JKU8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Lmx1aQ9JKU8 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.13□□□□□ -2.39
Lmx1aQ9JKU8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Scarna8-201ENSMUST00000158333 131 ntBASIC0.12□□□□□ -2.39
Lmx1aQ9JKU8 Mir100-201ENSMUST00000175270 80 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms