Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Vps53Q8CCB4 Mir343-201ENSMUST00000102360 75 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm22963-201ENSMUST00000157960 91 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm24880-201ENSMUST00000158776 85 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm22708-201ENSMUST00000158987 103 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm20409-201ENSMUST00000173457 130 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Mir3098-201ENSMUST00000175416 87 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm23419-201ENSMUST00000175523 84 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Vps53Q8CCB4 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.65□□□□□ -2.15
Vps53Q8CCB4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm24916-201ENSMUST00000157287 79 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm25367-201ENSMUST00000158846 106 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm25838-201ENSMUST00000158920 120 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm16539-201ENSMUST00000160086 327 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.64□□□□□ -2.15
Vps53Q8CCB4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm25274-201ENSMUST00000104296 135 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm12432-201ENSMUST00000119540 186 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm23434-201ENSMUST00000157179 100 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Mir3094-201ENSMUST00000175121 64 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Mir7059-201ENSMUST00000184825 59 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Gm37796-201ENSMUST00000195327 134 ntBASIC1.63□□□□□ -2.15
Vps53Q8CCB4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm25611-201ENSMUST00000104017 133 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm25879-201ENSMUST00000104330 107 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm22451-201ENSMUST00000122803 151 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Snora24-201ENSMUST00000174989 130 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm24154-201ENSMUST00000175261 130 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm23375-201ENSMUST00000175407 83 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Mir6377-201ENSMUST00000183760 114 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.62□□□□□ -2.15
Vps53Q8CCB4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.61□□□□□ -2.15
Vps53Q8CCB4 Gm23329-201ENSMUST00000157415 108 ntBASIC1.61□□□□□ -2.15
Vps53Q8CCB4 Gm22200-201ENSMUST00000158614 67 ntBASIC1.61□□□□□ -2.15
Vps53Q8CCB4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.61□□□□□ -2.15
Vps53Q8CCB4 Gm26123-201ENSMUST00000083363 135 ntBASIC1.61□□□□□ -2.15
Vps53Q8CCB4 Gm24030-201ENSMUST00000083931 164 ntBASIC1.61□□□□□ -2.15
Vps53Q8CCB4 Mir547-201ENSMUST00000102051 78 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Mir653-201ENSMUST00000102402 85 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Mir544-201ENSMUST00000103813 78 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm22815-201ENSMUST00000157451 62 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm25011-201ENSMUST00000158398 126 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm25044-201ENSMUST00000158603 104 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm24842-201ENSMUST00000158681 54 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Vps53Q8CCB4 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm24148-201ENSMUST00000082762 80 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm24410-201ENSMUST00000083433 107 ntBASIC1.6□□□□□ -2.15
Vps53Q8CCB4 Gm25091-201ENSMUST00000103997 71 ntBASIC1.59□□□□□ -2.15
Vps53Q8CCB4 Gm22558-201ENSMUST00000157326 95 ntBASIC1.59□□□□□ -2.15
Vps53Q8CCB4 Gm25976-201ENSMUST00000158695 130 ntBASIC1.59□□□□□ -2.15
Vps53Q8CCB4 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.59□□□□□ -2.16
Vps53Q8CCB4 Gm22003-201ENSMUST00000101885 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm22129-201ENSMUST00000179034 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm23410-201ENSMUST00000179967 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm22756-201ENSMUST00000180118 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm22505-201ENSMUST00000082956 108 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm22363-201ENSMUST00000083100 108 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Snord1a-201ENSMUST00000083160 74 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm23814-201ENSMUST00000083230 102 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Gm23095-201ENSMUST00000083446 107 ntBASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Vps53Q8CCB4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Vps53Q8CCB4 Gm26301-201ENSMUST00000104813 95 ntBASIC1.57□□□□□ -2.16
Vps53Q8CCB4 Mir7052-201ENSMUST00000184821 65 ntBASIC1.57□□□□□ -2.16
Vps53Q8CCB4 Gm23299-201ENSMUST00000082708 79 ntBASIC1.57□□□□□ -2.16
Vps53Q8CCB4 Gm25170-201ENSMUST00000104191 129 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm12013-201ENSMUST00000121971 155 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm22425-201ENSMUST00000158532 138 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm28256-201ENSMUST00000188953 139 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm28559-201ENSMUST00000190532 139 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm42795-201ENSMUST00000198847 76 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.56□□□□□ -2.16
Vps53Q8CCB4 Gm25610-201ENSMUST00000104016 129 ntBASIC1.55□□□□□ -2.16
Vps53Q8CCB4 Gm24894-201ENSMUST00000122744 118 ntBASIC1.55□□□□□ -2.16
Vps53Q8CCB4 Gm23328-201ENSMUST00000157418 132 ntBASIC1.55□□□□□ -2.16
Vps53Q8CCB4 Gm25069-201ENSMUST00000175238 86 ntBASIC1.55□□□□□ -2.16
Vps53Q8CCB4 Gm37330-201ENSMUST00000192606 153 ntBASIC1.55□□□□□ -2.16
Vps53Q8CCB4 Gm25753-201ENSMUST00000116792 121 ntBASIC1.54□□□□□ -2.16
Vps53Q8CCB4 Gm23083-201ENSMUST00000157851 116 ntBASIC1.54□□□□□ -2.16
Vps53Q8CCB4 Gm44807-201ENSMUST00000206115 154 ntBASIC1.54□□□□□ -2.16
Vps53Q8CCB4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.54□□□□□ -2.16
Vps53Q8CCB4 Gm26168-201ENSMUST00000083787 112 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms