Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24493-201ENSMUST00000083805 143 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trim47Q8C0E3 Gm11856-201ENSMUST00000118712 276 ntBASIC2.8□□□□□ -1.96
Trim47Q8C0E3 Gm24668-201ENSMUST00000158935 104 ntBASIC2.8□□□□□ -1.96
Trim47Q8C0E3 Gm25241-201ENSMUST00000174909 84 ntBASIC2.8□□□□□ -1.96
Trim47Q8C0E3 Gm26217-201ENSMUST00000175212 84 ntBASIC2.8□□□□□ -1.96
Trim47Q8C0E3 Gm24937-201ENSMUST00000122597 134 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm15654-201ENSMUST00000152660 300 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm25866-201ENSMUST00000158245 112 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm25160-201ENSMUST00000158914 102 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm26398-201ENSMUST00000179015 127 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm6293-201ENSMUST00000050339 195 ntBASIC2.79□□□□□ -1.96
Trim47Q8C0E3 Gm22752-201ENSMUST00000102083 109 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm24075-201ENSMUST00000158175 72 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm23726-201ENSMUST00000178937 67 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm5900-201ENSMUST00000179862 375 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Mir6379-201ENSMUST00000183392 115 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm25635-201ENSMUST00000082675 131 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.78□□□□□ -1.96
Trim47Q8C0E3 Mir7009-201ENSMUST00000184519 64 ntBASIC2.77□□□□□ -1.97
Trim47Q8C0E3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim47Q8C0E3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm25798-201ENSMUST00000082641 107 ntBASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm24698-201ENSMUST00000083883 130 ntBASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.76□□□□□ -1.97
Trim47Q8C0E3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm22099-201ENSMUST00000157925 123 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm22416-201ENSMUST00000158590 88 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm25119-201ENSMUST00000158815 88 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Mir7215-201ENSMUST00000200383 51 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm25899-201ENSMUST00000082672 141 ntBASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim47Q8C0E3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Gm24378-201ENSMUST00000122699 106 ntBASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Gm25011-201ENSMUST00000158398 126 ntBASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Gm23375-201ENSMUST00000175407 83 ntBASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim47Q8C0E3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.74□□□□□ -1.97
Trim47Q8C0E3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim47Q8C0E3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.73□□□□□ -1.97
Trim47Q8C0E3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Gm24851-201ENSMUST00000158028 103 ntBASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Mir30f-201ENSMUST00000196073 92 ntBASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.72□□□□□ -1.97
Trim47Q8C0E3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Mir20b-201ENSMUST00000102087 80 ntBASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Gm3852-201ENSMUST00000182781 264 ntBASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Gm27419-201ENSMUST00000184576 109 ntBASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Gm25820-202ENSMUST00000197479 128 ntBASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Mir127-201ENSMUST00000093568 70 ntBASIC2.71□□□□□ -1.98
Trim47Q8C0E3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Trim47Q8C0E3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.7□□□□□ -1.98
Trim47Q8C0E3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.7□□□□□ -1.98
Trim47Q8C0E3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Trim47Q8C0E3 Gm26290-201ENSMUST00000158891 145 ntBASIC2.7□□□□□ -1.98
Trim47Q8C0E3 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.7□□□□□ -1.98
Trim47Q8C0E3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trim47Q8C0E3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Gm26213-201ENSMUST00000158582 110 ntBASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Mir3075-201ENSMUST00000175340 85 ntBASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Mir6390-201ENSMUST00000184405 129 ntBASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Gm43038-201ENSMUST00000202359 88 ntBASIC2.69□□□□□ -1.98
Trim47Q8C0E3 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Mir429-201ENSMUST00000083493 83 ntBASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Trim47Q8C0E3 Gm23996-201ENSMUST00000158062 131 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Gm24210-201ENSMUST00000158263 133 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Gm25014-201ENSMUST00000158401 103 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Gm25044-201ENSMUST00000158603 104 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Gm20391-201ENSMUST00000174722 106 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Snora24-201ENSMUST00000174989 130 ntBASIC2.68□□□□□ -1.98
Trim47Q8C0E3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms