Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim35Q8C006 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Trim35Q8C006 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Trim35Q8C006 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim35Q8C006 Gm26141-201ENSMUST00000175299 126 ntBASIC3.46□□□□□ -1.86
Trim35Q8C006 Gm27937-201ENSMUST00000183605 88 ntBASIC3.46□□□□□ -1.86
Trim35Q8C006 Gm24147-201ENSMUST00000082763 144 ntBASIC3.46□□□□□ -1.86
Trim35Q8C006 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.46□□□□□ -1.86
Trim35Q8C006 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim35Q8C006 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Trim35Q8C006 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm12276-201ENSMUST00000121709 301 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm22380-201ENSMUST00000157479 95 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm25522-201ENSMUST00000158394 105 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm24553-201ENSMUST00000158653 131 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm23775-201ENSMUST00000158991 249 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm16111-201ENSMUST00000162128 285 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Gm23925-201ENSMUST00000082471 132 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Snora75-201ENSMUST00000082903 133 ntBASIC3.45□□□□□ -1.86
Trim35Q8C006 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim35Q8C006 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim35Q8C006 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm25759-201ENSMUST00000103988 129 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm22792-201ENSMUST00000157225 133 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm23590-201ENSMUST00000157661 104 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm24730-201ENSMUST00000158228 117 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Trav5n-3-201ENSMUST00000164511 270 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.44□□□□□ -1.86
Trim35Q8C006 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim35Q8C006 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim35Q8C006 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm24580-201ENSMUST00000103965 131 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm24403-201ENSMUST00000104616 130 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm13076-201ENSMUST00000118041 204 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm22203-201ENSMUST00000158605 58 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm22887-201ENSMUST00000178586 107 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm6607-201ENSMUST00000215035 328 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm21007-201ENSMUST00000221024 326 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 CT485608.2-201ENSMUST00000227210 291 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm10161-201ENSMUST00000091506 204 ntBASIC3.43□□□□□ -1.86
Trim35Q8C006 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim35Q8C006 Gm23532-201ENSMUST00000104569 112 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm25438-201ENSMUST00000158281 110 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm25600-201ENSMUST00000158357 106 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm25835-201ENSMUST00000158917 144 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Mir7062-201ENSMUST00000185038 66 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm28358-202ENSMUST00000189292 223 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm43907-201ENSMUST00000203128 117 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.42□□□□□ -1.86
Trim35Q8C006 Gm25087-201ENSMUST00000101992 78 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm22590-201ENSMUST00000104247 128 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm23911-201ENSMUST00000104596 134 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm27592-201ENSMUST00000157729 126 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm22174-201ENSMUST00000175050 125 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm22692-201ENSMUST00000175055 125 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm27634-201ENSMUST00000175060 126 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm24333-201ENSMUST00000175101 84 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm22460-201ENSMUST00000175269 124 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm25535-201ENSMUST00000175364 125 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm24365-201ENSMUST00000175384 125 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm44310-201ENSMUST00000175424 126 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm22639-201ENSMUST00000175591 125 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm24979-201ENSMUST00000178626 126 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm27743-201ENSMUST00000185136 126 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Snord35b-201ENSMUST00000082833 87 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Mir193a-201ENSMUST00000083461 66 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Gm26467-201ENSMUST00000097257 78 ntBASIC3.41□□□□□ -1.86
Trim35Q8C006 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trim35Q8C006 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim35Q8C006 Gm24728-201ENSMUST00000158226 125 ntBASIC3.4□□□□□ -1.87
Trim35Q8C006 Mir3108-201ENSMUST00000175500 79 ntBASIC3.4□□□□□ -1.87
Trim35Q8C006 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Trim35Q8C006 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim35Q8C006 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.4□□□□□ -1.87
Trim35Q8C006 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim35Q8C006 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
Trim35Q8C006 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim35Q8C006 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm23955-201ENSMUST00000157214 100 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm24314-201ENSMUST00000158274 123 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm25440-201ENSMUST00000158279 154 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Mir3106-201ENSMUST00000175401 82 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm44469-201ENSMUST00000198558 79 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm44399-201ENSMUST00000205043 226 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Snora3-201ENSMUST00000083082 132 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Gm24494-201ENSMUST00000083804 81 ntBASIC3.39□□□□□ -1.87
Trim35Q8C006 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim35Q8C006 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim35Q8C006 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim35Q8C006 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim35Q8C006 Gm25519-201ENSMUST00000158392 127 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 Mir6408-201ENSMUST00000183643 91 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 Gm27648-201ENSMUST00000184315 107 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 Mir6914-201ENSMUST00000184999 69 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 Gm43239-201ENSMUST00000200131 201 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.38□□□□□ -1.87
Trim35Q8C006 Gm25802-201ENSMUST00000082639 77 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms